Scientific Computing
Numerical simulation of real-world phenomena provides fertile ground for building interdisciplinary relationships. The SCI Institute has a long tradition of building these relationships in a win-win fashion – a win for the theoretical and algorithmic development of numerical modeling and simulation techniques and a win for the discipline-specific science of interest. High-order and adaptive methods, uncertainty quantification, complexity analysis, and parallelization are just some of the topics being investigated by SCI faculty. These areas of computing are being applied to a wide variety of engineering applications ranging from fluid mechanics and solid mechanics to bioelectricity.
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Epilepsy Detection and MRI |
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The goal of this collaboration is to develop and validate a new approach to characterizing epileptogenic foci and thereby make curative surgery available to a larger population at an earlier age. We will achieve this by developing an optimized MRI and EEG analysis strategy to enable improved pediatric epilepsy surgical planning (ESP). The primary outcome of pediatric ESP is identification of epileptogenic foci in order to determine if the subject is a candidate for neurosurgery. The nature and location of these foci determine if they may be targeted for neurosurgical resection. Today, Children's Hospital sees two to four pediatric patients a week for extended evaluation. The pediatric ESP process of imaging acquisition and analysis, utilizing MRI and scalp EEG, is largely a qualitative process. The ambiguity of foci determination and localization increases the difficulty of carrying out effective patient care. However, recent technical advances in data acquisition for EEG and MRI, and most importantly in improved algorithms for patient specific post-acquisition processing, offer the possibility of dramatically improved accuracy. This improved accuracy is made possible by the provision of stronger constraints on the inverse problem of EEG source localization and by the fusion of source localization data from EEG, conventional MRI and DT-MRI. |
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Stimulation of Bone Growth for Prosthetic Devices in Amputees |
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Young, otherwise healthy amputees form a small but growing population of patients, many of them the casualties of combat, and there is a persistent need in this group for improvements in the fixation of prosthetic limbs. A recent approach to this problem is to embed metallic posts into the remnant bone of the limb and thus provide a stable fixation point that reduces the abrasion and contact wounds of the typical stump-and-socket prosthetic fixation. One drawback to this approach is the long (many months) healing time required for full embedding of the implant, a process we hope to accelerate through the application of an electric field across the interface from the bone to the implant. It is known that electric fields facilitate bone growth so that attachment of external stimulating electrodes could accelerate bone/implant attachment and reduce healing time. However, this is a novel application of the concept with no previous data to help determine optimal electrode location or applied field values. We are using patient specific, image based modeling to create simulations of the limb, the implant, and the spatial distributions of electric fields that result from application of surface electrodes.
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Simulation Study of Cardiac Defibrillation in Children |
Implantable Cardiac Defibrillators (ICDs) save the lives of patients with unstable heart rhythms and 100,000 patients receive these devices per year in the US. Their use in children is less frequent and less standardized than in adults so that determining efficient electrode placement is challenging and uncertain. We are collaborating with J. Triedman, M.D. at Children's Hospital Boston and M. Jolley, M.D. at Stanford University to develop interactive finite element (FEM) computational models to test electrode locations for their effectiveness in defibrillation in children. The models come from CT or MRI scans segmented into tissue types and then meshed for FEM. The system also includes a library of realistically shaped ICD case and wire electrodes and an interactive interface allows the user to easily place and move the electrodes in the model to evaluate different implantation locations. To date we have fully segmented three CT scans, from 2, 10, and 27 year-old subjects, and have created a database of approximately 100 suitable electrode locations per model, which we are testing for bioelectric field strength and homogeneity. Initial findings have included evaluating the effectiveness of standard locations in adults and novel locations in children. |
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