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G. Adluru, Y. Gur, J. Anderson, L. Richards, N. Adluru, E. DiBella. “Assessment of white matter microstructure in stroke patients using NODDI,” In Proceedings of the 2014 IEEE Int. Conf. Engineering and Biology Society (EMBC), 2014.

S.P. Awate, R.T. Whitaker. “Multiatlas Segmentation as Nonparametric Regression,” In IEEE Trans Med Imaging, April, 2014.
PubMed ID: 24802528

S.P. Awate, Y.-Y. Yu, R.T. Whitaker. “Kernel Principal Geodesic Analysis,” In Proceedings of the European Conference on Machine Learning and Principles and Practice of Knowledge Discovery in Databases (ECML PKDD), Springer LNAI, 2014.

H. Bhatia, V. Pascucci, R.M. Kirby, P.-T. Bremer. “Extracting Features from Time-Dependent Vector Fields Using Internal Reference Frames,” In Computer Graphics Forum (Proceedings of EuroVis), Vol. 33, No. 3, pp. 21--30. June, 2014.

A. Bigelow, S. Drucker, D. Fisher, M.D. Meyer. “Reflections on How Designers Design With Data,” In Proceedings of the ACM International Conference on Advanced Visual Interfaces (AVI), Note: Awarded Best Paper!, 2014.

SCI Institute. Note: BioFEM: A SCIRun PowerApp that computes the electric field in a volume produced by a set of dipoles. Scientific Computing and Imaging Institute (SCI), Download from:, 2014.

CIBC. Note: BioImage: A SCIRun Power App for processing and visualizing medical image volumes. Scientific Computing and Imaging Institute (SCI), Download from:, 2014.

CIBC. Note: BioPSE: Problem Solving Environment for modeling, simulation, image processing, and visualization for biomedical computing applications. Scientific Computing and Imaging Institute (SCI), Download from:, 2014.

CIBC. Note: BioTensor: A SCIRun PowerApp for processing and visualizing diffusion tensor images. Scientific Computing and Imaging Institute (SCI), Download from:, 2014.

J.J.E. Blauer, D. Swenson, K. Higuchi, G. Plank, R. Ranjan, N. Marrouche, and R.S. MacLeod. “Sensitivity and Specificity of Substrate Mapping: An In Silico Framework for the Evaluation of Electroanatomical Substrate Mapping Strategies,” In Journal of Cardiovascular Electrophysiology, Vol. 25, No. 7, Note: Featured on journal cover., pp. 774--780. May, 2014.

P.-T. Bremer, I. Hotz, V. Pascucci, R. Peikert. “Topological Methods in Data Analysis and Visualization III,” Mathematics and Visualization, Springer, 2014.
ISBN: 978-3-319-04099-8

J. Bronson, J.A. Levine, R.T. Whitaker. “Lattice cleaving: a multimaterial tetrahedral meshing algorithm with guarantees,” In IEEE Transactions on Visualization and Computer Graphics (TVCG), pp. 223--237. 2014.
DOI: 10.1109/TVCG.2013.115
PubMed ID: 24356365

B. Chapman, H. Calandra, S. Crivelli, J. Dongarra, J. Hittinger, C.R. Johnson, S.A. Lathrop, V. Sarkar, E. Stahlberg, J.S. Vetter, D. Williams. “ASCAC Workforce Subcommittee Letter,” DOE ASCAC Committee Report, 2014.

CIBC. Note: Data Sets: NCRR Center for Integrative Biomedical Computing (CIBC) data set archive. Download from:, 2014.

CIBC. Note: Cleaver: A MultiMaterial Tetrahedral Meshing Library and Application. Scientific Computing and Imaging Institute (SCI), Download from:, 2014.

A. Dubey, A. Almgren, John Bell, M. Berzins, S. Brandt, G. Bryan, P. Colella, D. Graves, M. Lijewski, F. Löffler, B. O’Shea, E. Schnetter, B. Van Straalen, K. Weide. “A survey of high level frameworks in block-structured adaptive mesh refinement packages,” In Journal of Parallel and Distributed Computing, 2014.
DOI: 10.1016/j.jpdc.2014.07.001

S. Durrleman, M. Prastawa, N. Charon, J.R. Korenberg, S. Joshi, G. Gerig, A. Trouvé. “Morphometry of anatomical shape complexes with dense deformations and sparse parameters,” In NeuroImage, 2014.
DOI: 10.1016/j.neuroimage.2014.06.043

L.T. Edgar, C.J. Underwood, J.E. Guilkey, J.B. Hoying, J.A. Weiss. “Extracellular matrix density regulates the rate of neovessel growth and branching in sprouting angiogenesis,” In PLOS one, Vol. 9, No. 1, 2014.
DOI: 10.1371/journal.pone.0085178

S. Eichelbaum, M. Dannhauer, M. Hlawitschka, D. Brooks, T.R. Knosche, G. Scheuermanna. “Visualizing Simulated Electrical Fields from Electroencephalography and Transcranial Electric Brain Stimulation: A Comparative Evaluation,” In Neuroimage, 2014.
DOI: 10.1016/j.neuroimage.2014.04.085

S. Elhabian, Y. Gur, C. Vachet, J. Piven, M. Styner, I. Leppert, G.B. Pike, G. Gerig. “A Preliminary Study on the Effect of Motion Correction On HARDI Reconstruction,” In Proceedings of the 2014 IEEE International Symposium on Biomedical Imaging (ISBI), pp. (accepted). 2014.

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