Selected
Publications Guido Gerig 1998 - today
A searchable database of
publications of the UNC MIDAG group (till August 2002) and other relevant
research papers is found at MIDAG-BIBLIO. An unformattted, temporary but updated database of
publications of the UNC MIDAG group is found at MIDAG-BIBLIO-TEMP. PubMed Search: PubMed A full
list of older publications (before 1998) for electronic transfer can be found
in the homepage of my former institution "Image Science Lab, EE
Department, Swiss Federal Institute of Technology ETH Zurich,
Switzerland": BIWI . Please
press the button "Publications" and select dates (optional) and
author to get the abstract, bibliography and a gzipped
PS-file for ftp transfer. ADS Site
Map at Harvard ADS. Submitted
o
Heather Cody Hazlett, Michele
Poe, Amy A. Lightbody, Guido Gerig, James R. MacFall, Allison
K. Ross, James Provenzale, Arianna Martin, Allan L Reiss, and Joseph Piven, Teasing apart the heterogeneity of autism: Same
Behavior, different brains in toddlers with Autistic Disorder with and
without fragile X syndrome, submitted to Journal of Neurodevelopmental
Disorders, Springer, September 2008 o
Carissa Cascio, Ph.D.,
Matthew J. Gribbin, Ph.D. , Sylvan Gouttard, Rachel G. Smith, Matthieu Jomier, Michele D.
Poe, Ph.D., Michael Graves, Heather C. Hazlett,
Ph.D., Keith Muller, Ph.D., Guido
Gerig, Ph.D., and Joseph Piven, M.D.,
"Fractional Anisotropy Distribution in 2-6 year old Chrildren
with Autism", submitted June 2008 o
Kevin Gorczowski, Martin Styner, Ja Yeon
Jeong, J. S. Marron,
Joseph Piven, Heather Cody Hazlett,
Stephen M. Pizer,
Guido Gerig, Multi-object Analysis
of Volume, Pose, and Shape using Statistical Discrimination, submitted IEEE
PAMI Oct. 2008 o
Matthew Gribbin, Meagan
Clement, Keith Muller, Michele Poe, Carissa Cascio,
Matthew Jomier, Joseph Piven,
and Guido Gerig, Statistical
analysis of diffusion tensor image data based on first principles, submitted 2008 Peer reviewed
journal papers
o
Marcel Prastawa, Elizabeth Bullitt,
and Guido Gerig, Simulation of
Brain Tumors in MR Images for Evaluation of Segmentation Efficacy, August
2008, (in Press Medical Image Analysis MedIA) o
Rebecca C. Knickmeyer,
Sylvain Gouttard, Chaeryon
Kang, Dianne Evans, Kathy Wilber, Keith J. Smith, Robert M. Hamer, Weili Lin, Guido Gerig, John H. Gilmore, A
Structural MRI Study of Human Brain Development from Birth to Two Years, The
Journal of Neuroscience (In Press) o
Matthew W. Mosconi, Heather
Cody Hazlett, Michele D. Poe, Guido Gerig, Rachel Gimpel Smith, and Joseph
Piven, A longitudinal study of amygdala
volume and joint attention in 2-4 year old children with autism, Archives of
General Psychiatry (In Press) o
Casey B. Goodlett, P. Thomas
Fletcher, John H. Gilmore, and Guido
Gerig, "Group Analysis of DTI Fiber Tract Statistics with
Application to Neurodevelopment", NeuroImage
(In Press) o
Kubicki M, Styner M, Bouix S, Gerig G, Markant
D, Smith K, Kikinis R, McCarley
RW, Shenton ME. Reduced Interhemispheric
Connectivity in Schizophrenia- Tractography Based
Segmentation of the Corpus Callosum. /Schizophr
Res/ (In Press). o
Niyati Mukherjee, Chaeryon Kang, Honor
M. Wolfe, Barbara S. Hertzberg, J.
Keith Smith, Weili Lin, Guido Gerig, Robert M. Hamer, John H.
Gilmore, Discordance of Prenatal and
Neonatal Brain Development in Twins, August 2008, in press in Early Human
Development o
Wei Gao, Yasheng
Chen, Guido Gerig, Ph.D. J Keith
Smith, M.D., Valerie Jewells, John H Gilmore, Weili
Lin, Temporal and Spatial Development of Axonal Maturation and Myelination of White Matter in the Developing Brain, AJNR
(In Press) o
Weili Lin, Ph.D., Quan Zhu, M.S., Wei Gao, M.S. Yasheng Chen, D.Sc., Cheng-Hong Toh,
M.D., Martin Styner, Ph.D., Guido Gerig, Ph.D., J
Keith Smith, M.D., Ph.D., Bharat Biswal, Ph.D.,
John Gilmore, M.D., Functional Connectivity Magnetic Resonance Imaging
Reveals Cortical Functional Connectivity in the Developing Brain, in print
AJNR, to appear Fall 2008 o
Fan Zhang, Edwin R. Hancock, Casey Goodlett
and Guido Gerig, Probabilistic
White Matter Fiber Tracking using, Particle Filtering and von Mises-Fisher Sampling, Medical Image Analysis MedIA, in print o
John H. Gilmore, MD; Lauren Smith, BA, Honor Wolfe, MD;
Barbara Hertzberg, MD; J. Keith Smith, MD; Nancy Chescheir;
Dianne Evans, Chaeryon Kang; Robert M. Hamer, Weili Lin, Guido Gerig, Prenatal Mild Ventriculomegaly Predicts Abnormal Development of the
Neonatal Brain, in print Biological Psychiatry, to appear Summer 2008 2008 Peer reviewed
full length conference papers
o
A.Fedorov, E.Billet, M.Prastawa, G.Gerig, A.Radmanesh, S.K.Warfield, R.Kikinis, and N.Chrisochoides,
Evaluation of Brain MRI Alignment with the Robust Hausdorff
Distance Measures, accepted as oral presentation at ISVC08 (4th
Int. Symp. On Visual Computing), to appear Springer
LNCS Fall 2008 o
Marcel Prastawa and Guido Gerig, Brain Lesion
Segmentation through Physical Model Estimation, accepted as oral presentation
at ISVC08 (4th Int. Symp. On Visual
Computing), to appear Springer LNCS Fall 2008 o
Casey Goodlett, P. Thomas
Fletcher, John Gilmore, and Guido
Gerig, Group Statistics of DTI Fiber Bundles Using Spatial Functions of
Tensor Measures, Proc. MICCAI’08, Lecture Notes in Computer Science LNCS,
Springer Verlag, Vol. 5241, Sept. 2008, pp. 1068 --
1073, nominated best paper award o
Sylvain Gouttard, Martin Styner, Marcel Prastawa, Joseph
Piven, and Guido
Gerig, Assessment of Reliability of Multi-site Neuroimaging
via Traveling Phantom Study, Proc. MICCAI’08, Lecture Notes in Computer
Science LNCS, Springer Verlag, Vol. 5242, Sept.
2008, pp. 263 -- 270 o
Shun Xu, Martin Styner, and Guido
Gerig, “Multivariate Nonlinear Mixed Model to
Analyze Longitudinal Image Data: MRI Study of Early Brain Development”, Proc.
of IEEE Workshop on Mathematical Methods in Biomedical Image Analysis (MMBIA)
2008, June 2008 o
Styner, M., Oguz, I., Heimann, T., Gerig,
G., Minimum description length with local geometry, Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International
Symposium on 14-17 May 2008 Page(s): 1283 - 1286 Digital Object Identifier
10.1109/ISBI.2008.4541238 o
Xu, Shun C. A. Styner, Martin, Gilmore, John H. Gerig, Guido, Multivariate longitudinal statistics for neonatal-pediatric
brain tissue development, Proc. of SPIE, Medical Imaging 2008: Im. Proc., Vol. #, pp. , Feb. 17, 2008 2007 Peer reviewed
journal papers
o
J. H. Gilmore, W. Lin, I. Corouge, Y. S. K. Vetsa, J. K.Smith, Ch. Kang, H. Gu, R.M. Hamer, J. A. Lieberman, G. Gerig, Early Postnatal Development of Corpus Callosum and Corticospinal
White Matter Assessed with Quantitative Tractography, AJNR Am J Neuroradiol.
2007 Oct;28(9):1789-95 o
Huang X, Lee YZ, McKeown M, Gerig G, Gu
H, Lin W, Lewis MM, Ford S, Troster AI, Weinberger
DR, Styner , Asymmetrical ventricular enlargement
in Parkinson's disease. Mov Disord
2007 Aug 15;22(11):1657-60 o
Belmonte MK, Mazziotta JC, Minshew NJ, Evans AC, Courchesne
E, Dager SR, Bookheimer
SY, Aylward EH, Amaral
DG, Cantor RM, Chugani DC, Dale AM, Davatzikos C, Gerig
G, Herbert MR, Lainhart JE, Murphy DG, Piven J, Reiss AL, Schultz RT, Zeffiro
TA, Levi-Pearl, Offering to Share: How to Put Heads Together in Autism Neuroimaging. J Autism Dev Disord
2007 Mar 9;(): o
Taylor WD, MacFall JR,
Gerig G, Krishnan KR. Structural
integrity of the uncinate fasciculus in geriatric
depression: Relationship with age of onset. Neuropsychiatric Disease and
Treatment 2007; 3(5):669-674 o Carissa J. Cascio, Guido
Gerig and Joseph Piven, Diffusion Tensor
Imaging: Application to the Study of the Developing Brain, J Am Acad Child Adolesc Psychiatry.
2007 Feb;46(2):213-23 o Gilmore JH, Lin W, Prastawa MW,
Looney CB, Vetsa YSK, Knickmeyer
RC, Evans DD, Smith JK, Hamer RM, Lieberman JA,
Gerig G. Regional gray matter growth, sexual dimorphism, and cerebral
asymmetry in the neonatal brain. Journal of Neuroscience
2007;27(6):1255-1260. Acrobat Reader format [1106kb] 2007
Peer reviewed full length conference papers
o Goodlett, Casey , Fletcher, P. Thomas ,
Lin, Weili , and Gerig, Guido, "Quantification
of measurement error in DTI: Theoretical predictions and validation", Proc.
MICCAI’07, Springer LNCS 4792, Nov. 2007, pp. 10-17 o Fan Fan Zhang, Casey Goodlett, Edwin Hancock, Guido Gerig, "Probabilistic
White Matter Fiber Tracking using Particle Filtering", accepted CVPR
workshop EMMCVPR 2007 o Fan Zhang et al., Probabilistic White Matter Fiber
Tracking using Particle Filtering, Proc.
MICCAI 2007, Springer LNCS 4791, Nov. 2007, pp. 144-151 o Terriberry, Timothy B., Damon, James N., Pizer, Stephen M., Joshi, Sarang
C. and Gerig, Guido, "Population-based Fitting of Medial Shape Models
with Correspondence Optimization", in Proceedings IPMI'07, Information Processing
in Med Imaging, Springer LNCS, 2007;20():700-12 o Kevin Gorczowski, Martin Styner, Ja Yeon
Jeong, J. S. Marron,
Joseph Piven, Heather Cody Hazlett,
Stephen M. Pizer, Guido Gerig, Statistical Shape
Analysis of Multi-Object Complexes, Proc.
CVPR’07, IEEE Press o C. B. Goodlett, P. T. Fletcher,
W. Lin, and G. Gerig, Noise-induced bias in low-direction diffusion tensor
MRI: Replication of Monte-Carlo simulation with in-vivo scans, short paper
Proc. ISMRM 2007 o D Nain, M Styner, M Niethammer, J J Levitt, M E Shenton, G Gerig, A Bobick, A Tannenbaum, Statistical shape analysis of brain
structures using spherical wavelets, Proc. ISBI 2007, IEEE press o Martin Styner, Shun Xu, Mohammed El-Sayed, Guido
Gerig, Correspondence Evaluation in local shape analysis and structural
subdivision, Proc. ISBI 2007, IEEE press o Kevin Gorczowski, Martin Stynera, Ja Yeon
Jeonga, J. S. Marron,
Joseph Piven, Heather Cody, Hazlett,
Stephen M. Pizer, Guido Gerig, Discrimination
Analysis using Multi-object Statistics of Shape and Pose, Proc. SPIE conference, January 2007 o Sylvain Gouttard, Martin Styner, Sarang Joshi, Rachel G.
Smith, Heather Cody, Guido Gerig, Subcortical
structure segmentation using probabilistic atlas prior, Proc. SPIE
conference, Feb. 2007 o M. Styner, I. Oguz, S. Xu, D. Pantazis, and G. Gerig. Statistical group differences in
anatomical shape analysis using hotelling T2
metric. Proc SPIE Medical Imaging Conference, Feb. 2007. 2006
Peer reviewed journal papers
o
John H.
Gilmore, Weili Lin, and Guido Gerig, IMAGES IN
NEUROSCIENCE: Fetal and Neonatal Brain Development, Am J Psychiatry, Dec
2006; 163: 2046. Acrobat Reader format [132kb] o
Carissa J. Cascio, Martin Styner, Rachel
G. Smith, Michele D. Poe, Guido Gerig, Heather C. Hazlett,
Matthieu Jomier, Roland Bammer, and Joseph Piven, Tractography-based segmentation of the corpus callosum reveals a reduced relationship to cortical white
matter volume in young children with developmental delay, Am J Psychiatry,
Dec 2006; 163: 2157 - 2163 Acrobat Reader format [199Kb] o
Carissa J. Cascio, Guido Gerig and Joseph Piven,
Diffusion Tensor Imaging: Application to the Study of the Developing Brain,
in print Journal of the American Academy of Child and Adolescent Psychiatry
JAACAP, August 2006 Acrobat Reader format [970kb] o
Isabelle Corouge, P.Thomas Fletcher, Sarang Joshi, Sylvain Gouttard,
Guido Gerig, Fiber Tract-Oriented Statistics for Quantitative Diffusion
Tensor MRI Analysis, Medical Image Analysis 10 (2006), 786 - 798 Acrobat Reader format [914kb] PubMed Entry o
Yushkevich, PA, Piven,
J., Cody Hazlett, H., Gimpel
Smith, R., Ho, S, Gee, J.J.Gerig, G.; User-Guided
3D Active Contour Segmentation of Anatomical Structures: Significantly
Improved Efficiency and Reliability, NeuroImage 31
(2006) 1116 - 1128 Acrobat Reader format [983Kb] PubMed Entry Link to
Elsevier Direct o
Heather Cody Hazlett, Michele D. Poe, Guido Gerig, Rachel Gimpel Smith and Joseph Piven,
Cortical Gray and White Brain Tissue Volume in Adolescents and Adults with Autism,
Biological Psychiatry, Volume 59, Issue 1, Pages 1-96 (1 January 2006) Acrobat Reader format [1.5Mb] PubMed Entry o
Peter Lorenzen, Marcel Prastawa, Brad
Davis, Guido Gerig, Elizabeth Bullitt, and Sarang
Joshi, Multi-Modal Image Set Registration and Atlas Formation, Medical Image
Analysis MEDIA, Elsevier, Vol 10 issue 3, pp
440-451, May 2006 Acrobat Reader format [600Kb] PubMed Entry 2006
Peer reviewed full length conference papers
o
Oguz, Ipek,
Gerig, Guido, Barre, Sebastien,
Styner, Martin, A Quantitative KWMeshVisu:
A Mesh Visualization Tool for Shape Analysis, 2006, ISC/NA-MIC Workshop on
Open Science at MICCAI 2006, Online publication: http://hdl.handle.net/1926/220 o
Styner, M. and Oguz,
I. and Xu, S. and Brechbuhler,
C. and Pantazis, D. and Levitt, J. and Shenton, M. and Gerig, G.:Framework
for the Statistical Shape Analysis of Brain Structures using SPHARM-PDM, Open
Science Workshop at MICCAI 2006, Kopenhagen,
published at Insight Journal DSpace link: http://hdl.handle.net/1926/215 o
Martin Styner, Kevin Gorczowski, Tom
Fletcher, Ja Yeon Jeong, Stephen M. Pizer, Guido
Gerig, Multi-Object Statistics using Principal Geodesic Analysis in a
Longitudinal Pediatric Study, Lecture Notes in Computer Science LNCS No.
4091, G-Z Yang, T. Jiang, D. Shen, L. Gu and J. Yang, editors, Springer Verlag,
Proc. MIAR conference, pp. 1 - 8, August 2006 Acrobat Reader format [807Kb] o
Timothy B. Terriberry and Guido Gerig, A Continuous 3-D Medial Shape
Model With Branching, International Workshop on Mathematical Foundations of
Computational Anatomy MFCA-2006, in conjunction with MICCAI 2006 MFCA-2006 o
Improved
Correspondence for DTI Population Studies via Unbiased Atlas Building Casey Goodlett, Brad Davis, Remi
Jean, John Gilmore, and Guido Gerig, Lecture Notes in Computer Science LNCS,
Medical Image Computing and Computer-Assisted Intervention, Springer Verlag, Vol. 4191, Oct. 2006, pp. 260 - 267 Acrobat Reader format [1.17Mb] o
Computational
Anatomy to Assess Longitudinal Trajectory of Brain Growth, G. Gerig, B.
Davis, P. Lorenzen, Sh. Xu,
M. Jomier, J. Piven and
S. Joshi, to appear Proc. 3DPVT, June 2006 Acrobat Reader format [1.78Mb] o
Shun Xu, Martin Styner, Brad Davis, Sarang Joshi, Guido Gerig, Group Mean Differences of Voxel and Surface Objects via Nonlinear Averaging, in
IEEE International Symposium on Biomedical Imaging (ISBI), pp. 758-761, Apr.
2006 Acrobat Reader format [416Kb] o
Guido Gerig, Sarang Joshi, Tom Fletcher, Kevin Gorczowski,
Shun Xu, Stephen M. Pizer,
Martin Styner, "Statistics of populations of
images and its embedded objects: Driving applications in neuroimaging",
in IEEE International Symposium on Biomedical Imaging (ISBI), special session
Shape in Imaging, pp. 1120-1123, Apr. 2006 Acrobat Reader format [1.19Mb] o
Martin Styner, Matthieu Jomier, and Guido Gerig, Closed and open source neuroimage analysis tools and libraries at UNC, in IEEE
International Symposium on Biomedical Imaging (ISBI), special session Open
Source, pp. 702-705, Apr. 2006. Acrobat Reader format [188Kb] 2005
Peer reviewed journal papers
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