Designed especially for neurobiologists, FluoRender is an interactive tool for multi-channel fluorescence microscopy data visualization and analysis.
Large scale visualization on the Powerwall.
BrainStimulator is a set of networks that are used in SCIRun to perform simulations of brain stimulation such as transcranial direct current stimulation (tDCS) and magnetic transcranial stimulation (TMS).
Developing software tools for science has always been a central vision of the SCI Institute.
Ted Schomay

Ted Schomay - Graduate Student Research Assistant

WEB Lab 3720
phone (801) 585-1874
fax (801) 585-6513
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advisor Dr. Orly Alter

Background

BA in Physics (summa cum laude) and Mathematics, Univ. of Colorado, 2012

Current Responsibilities

I am working on a generalization of the singular value decomposition that will allow for comparing and contrasting large-scale datasets arranged in multiple high-order tensors with correspondance between all axes except one. An example of such a dataset collection is gene-expression, DNA copy number, and nucleosome measurements, each collected at matching time points, for multiple cell-types and growth conditions. This example would comprise three, fourth order tensors. Once this mathematical framework is developed, I will apply it to a biological dataset.

Research Interests

  • Computational Systems Biology
  • Biological Signal Processing