/trunk/src Developers: jthornoc

Login name:
jthornoc
Total Commits:
773 (4.1%)
Lines of Code:
27903 (12.3%)
Most Recent Commit:
2009-12-30 00:32

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Activity by Hour of Day for jthornoc

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Activity in Directories

Directory Changes Lines of Code Lines per Change
Totals 773 (100.0%) 27903 (100.0%) 36.0
CCA/Components/Arches/TransportEqns/ 90 (11.6%) 6801 (24.4%) 75.5
CCA/Components/Arches/ 181 (23.4%) 4715 (16.9%) 26.0
CCA/Components/SpatialOps/ 101 (13.1%) 3851 (13.8%) 38.1
CCA/Components/Arches/ChemMix/TabProps/ 7 (0.9%) 3279 (11.8%) 468.4
CCA/Components/SpatialOps/TransportEqns/ 85 (11.0%) 2504 (9.0%) 29.4
CCA/Components/Arches/CoalModels/ 61 (7.9%) 2229 (8.0%) 36.5
CCA/Components/Arches/SourceTerms/ 55 (7.1%) 1572 (5.6%) 28.5
CCA/Components/Arches/ChemMix/ 14 (1.8%) 1092 (3.9%) 78.0
CCA/Components/SpatialOps/CoalModels/ 45 (5.8%) 888 (3.2%) 19.7
CCA/Components/SpatialOps/SourceTerms/ 25 (3.2%) 502 (1.8%) 20.0
Packages/Uintah/CCA/Components/Arches/ 18 (2.3%) 149 (0.5%) 8.2
Packages/Uintah/orderAccuracy/test_config_files/Arches/ 3 (0.4%) 65 (0.2%) 21.6
Core/Grid/ 3 (0.4%) 45 (0.2%) 15.0
/ 1 (0.1%) 29 (0.1%) 29.0
CCA/Components/Arches/Mixing/ 14 (1.8%) 28 (0.1%) 2.0
CCA/Components/Schedulers/ 7 (0.9%) 26 (0.1%) 3.7
Core/Grid/Variables/ 11 (1.4%) 21 (0.1%) 1.9
Core/Util/ 1 (0.1%) 20 (0.1%) 20.0
CCA/Ports/ 2 (0.3%) 18 (0.1%) 9.0
CCA/Components/Models/Radiation/ 1 (0.1%) 16 (0.1%) 16.0
R_Tester/ 7 (0.9%) 11 (0.0%) 1.5
orderAccuracy/test_config_files/Arches/ 1 (0.1%) 9 (0.0%) 9.0
CCA/Components/Parent/ 2 (0.3%) 5 (0.0%) 2.5
StandAlone/tools/puda/ 1 (0.1%) 4 (0.0%) 4.0
StandAlone/tools/ 1 (0.1%) 4 (0.0%) 4.0
CCA/Components/MPMArches/ 5 (0.6%) 4 (0.0%) 0.8
Core/Thread/ 2 (0.3%) 3 (0.0%) 1.5
Core/Disclosure/ 2 (0.3%) 3 (0.0%) 1.5
CCA/Components/ 3 (0.4%) 3 (0.0%) 1.0
include/sci_defs/ 2 (0.3%) 2 (0.0%) 1.0
CCA/Components/Arches/Radiation/ 1 (0.1%) 2 (0.0%) 2.0
VisIt/udaReaderMTMD/ 1 (0.1%) 1 (0.0%) 1.0
StandAlone/ 1 (0.1%) 1 (0.0%) 1.0
CCA/Components/SimulationController/ 1 (0.1%) 1 (0.0%) 1.0
Packages/Uintah/CCA/Components/ 2 (0.3%) 0 (0.0%) 0.0
CCA/Components/ProblemSpecification/ 1 (0.1%) 0 (0.0%) 0.0
CCA/Components/Arches/TabProps/ 5 (0.6%) 0 (0.0%) 0.0
CCA/Components/Arches/Mixing/TabProps/ 10 (1.3%) 0 (0.0%) 0.0

Activity of jthornoc

Most Recent Commits

jthornoc 2009-12-30 00:32 Rev.: 45234

Adding some missing "VarLabel::destroy"s

0 lines of code changed in 6 files:

  • CCA/Components/Arches: DQMOM.cc (new)
  • CCA/Components/Arches/CoalModels: CoalModelFactory.cc (new), SimpleHeatTransfer.cc (changed)
jthornoc 2009-12-28 14:51 Rev.: 45233

Added ability to initialize scalars in geometry obects.

0 lines of code changed in 4 files:

  • CCA/Components/Arches/TransportEqns: EqnBase.h (new), ScalarEqn.cc (changed)
jthornoc 2009-12-23 01:11 Rev.: 45231

Corrections to the boundary condition for setting the particle velocity to the gas velocity.

0 lines of code changed in 2 files:

  • CCA/Components/Arches: BoundaryCond_new.cc (changed)
jthornoc 2009-12-23 00:30 Rev.: 45230

Better logic for the new time integrator.

0 lines of code changed in 2 files:

  • CCA/Components/Arches: Arches.cc (changed)
jthornoc 2009-12-22 22:58 Rev.: 45229

Whoops. Forgot to add "if" on the delete.

5 lines of code changed in 1 file:

  • CCA/Components/Arches: Arches.cc (+5 -4)
jthornoc 2009-12-22 19:08 Rev.: 45228

Hopefully cleaning up a few memory leaks.

16 lines of code changed in 8 files:

  • CCA/Components/Arches: Arches.cc (+4)
  • CCA/Components/Arches/CoalModels: CoalModelFactory.cc (+8 -8)
  • CCA/Components/Arches/SourceTerms: SourceTermFactory.cc (new)
  • CCA/Components/Arches/TransportEqns: DQMOMEqnFactory.cc (new), EqnFactory.cc (+1 -2)
jthornoc 2009-12-22 17:08 Rev.: 45227

Deleting the boundary condition object.

0 lines of code changed in 2 files:

  • CCA/Components/Arches/CoalModels: PartVel.cc (new)
jthornoc 2009-12-18 12:24 Rev.: 45214

Turning on exactComparison for these tests.

0 lines of code changed in 2 files:

  • R_Tester: ARCHES (changed)
jthornoc 2009-12-17 18:40 Rev.: 45209

MPMArches.cc:
Moved setAreaFraction from MPMArches.cc to ExplicitSolver.cc (with an "if d_MAlab" -- i.e., only called every time step if mpm is present.)

Arches.cc:
Added WestbrookDryer.h
Added initialization for "extra local labels" for source terms
Added some print statements for the header of the output stream
Added WestbrookDryer model registration

ArchesLabel.cc and .h:
Added a new label for mixture molecular weight (from Table)

BoundaryCond_new.cc:
Fixed a bug with the material index

ExplicitSolver.cc:
Added the setAreaFraction call that was moved from MPMArches

ExplicitTimeInt.h:
Added a check for zero density (inside a wall). I am planning on moving this division by density out of the time integrator and into the scalar eqn where it belongs. More to come...

Properties.cc, NewStaticMixingTable.*, Stream.h:
Added the mixture molecular weight and access to it

SourceTerms/:
Added a new Source Term (WestbrookDryer)
Added a virtual function for initializing the sources and any local dependent functions the source might require
Added "extraLocalLabel" vector for the sources in the base class.

ScalarEqn.cc:
Names the "old" transport label with the correct name.
Initialized Conv and Diff at the start of a time step to zero.
Added the clipping function at the end of the averaging.
Added dummyInit of RHS, FCONV, FDIFF
Grabbing the right old variable for copying in the dummyInit

DQMOMEqn.cc:
Passing in a modifieable weight into getICVariables...we may want to handle the cutoff differently
Initializing Fconv and Fdiff to zero at the start of every t_step.

PartVel.cc:
Changed the default behavior of the particle velocities on the boundary to require (user specified) values from the input file.

700 lines of code changed in 48 files:

  • CCA/Components/Arches: Arches.cc (+22 -1), ArchesLabel.cc (new), ArchesLabel.h (new), BoundaryCond_new.cc (+7 -6), ExplicitSolver.cc (+2), ExplicitTimeInt.h (+5), Properties.cc (new)
  • CCA/Components/Arches/CoalModels: PartVel.cc (+1 -1)
  • CCA/Components/Arches/Mixing: NewStaticMixingTable.cc (+8), NewStaticMixingTable.h (+1), Stream.h (new)
  • CCA/Components/Arches/SourceTerms: CoalGasDevol.cc (+47), CoalGasDevol.h (+7), CoalGasMomentum.cc (new), CoalGasMomentum.h (+7), ConstSrcTerm.cc (+45), ConstSrcTerm.h (+7), MMS1.cc (+43), MMS1.h (new), SourceTermBase.cc (new), SourceTermBase.h (+8 -8), WestbrookDryer.cc (new 296), WestbrookDryer.h (new 79), sub.mk (+1)
  • CCA/Components/Arches/TransportEqns: DQMOMEqn.cc (+7 -4), ScalarEqn.cc (+28 -6)
  • CCA/Components/MPMArches: MPMArches.cc (-1)
jthornoc 2009-12-13 19:36 Rev.: 45196

Fixing a bug in the boundary check. I believe this only affected the super_bee scheme.

0 lines of code changed in 2 files:

  • CCA/Components/Arches/TransportEqns: Discretization_new.h (changed)
jthornoc 2009-12-02 20:09 Rev.: 45152

Moved the diffusion calculation to the discretization class and removed all traces from DQMOMeqn and CCScalarEqn.
Also added doxygen comments to Discretization_new.h.

181 lines of code changed in 7 files:

  • CCA/Components/Arches/TransportEqns: DQMOMEqn.cc (+1 -82), DQMOMEqn.h (new), Discretization_new.h (+179 -21), ScalarEqn.cc (+1 -82), ScalarEqn.h (-23)
jthornoc 2009-12-01 19:08 Rev.: 45142

1) Added the setAreaFraction method to MPMArches.
2) Added new input files for DQMOM regression testing.
3) Added new tests for DQMOM/Scalar transport to the regression test.
4) Fixed an error in the methane_1m.ups file
5) Added central_limiter option to spec for Enthalpy_solver for consistency

9 lines of code changed in 2 files:

  • CCA/Components/MPMArches: MPMArches.cc (+1)
  • R_Tester: ARCHES (+8 -1)
jthornoc 2009-12-01 17:27 Rev.: 45141

Added a solver option: Lapack-svd
which uses svd to estimate a condition number (not to be confused with the SVD solver option).

3 lines of code changed in 1 file:

  • CCA/Components/Arches: DQMOM.cc (+3)
jthornoc 2009-11-20 11:29 Rev.: 45103

Need ghost cells for areaFraction

4 lines of code changed in 2 files:

  • CCA/Components/Arches/TransportEqns: DQMOMEqn.cc (+2 -2), ScalarEqn.cc (+2 -2)
jthornoc 2009-11-20 11:01 Rev.: 45100

Forgot to delete the d_newBC object.

0 lines of code changed in 2 files:

  • CCA/Components/Arches: BoundaryCondition.cc (new)
jthornoc 2009-11-19 15:39 Rev.: 45096

Fixed a missing ghost cell in previous commit.

2 lines of code changed in 1 file:

  • CCA/Components/Arches: BoundaryCondition.cc (+2 -2)
jthornoc 2009-11-19 13:52 Rev.: 45095

Added an area fraction variable that will be used to deal with intrusion and mpmWall boundary conditions in the interior domain. Also added a function to compute the area fraction based on the cell type.

Answers shouldn't change.

239 lines of code changed in 13 files:

  • CCA/Components/Arches: Arches.cc (+8), ArchesLabel.cc (+5), ArchesLabel.h (+2), BoundaryCond_new.cc (+49), BoundaryCond_new.h (new), BoundaryCondition.cc (+44), BoundaryCondition.h (+14), ExplicitSolver.cc (+8 -2)
  • CCA/Components/Arches/TransportEqns: DQMOMEqn.cc (+4 -1), Discretization_new.h (+93 -55), ScalarEqn.cc (+4 -1)
jthornoc 2009-11-02 18:02 Rev.: 45022


OSX Snow Leopard fixs from Dav. (First OSX to truely support 64 bits.)

M include/sci_defs/osx_testdefs.h.in

OSX Hack isn't used any more, so I removed it. Added the snow leopard #define.

M CCA/Components/Schedulers/OnDemandDataWarehouse.h

No one uses the boundary layer parameter so I removed it.

M CCA/Components/Schedulers/TaskGraph.h

- Removed tabs messing up indentation.
- Made a few params 'const'.

M CCA/Components/Schedulers/TaskGraph.cc

- Mostly cosmetics:
- Added some white space.
- Added some {}.
- Made a few params 'const'.

M CCA/Components/Schedulers/OnDemandDataWarehouse.cc

- An undefined boundary layer was being passed in even though no one uses it, so
default it to 0,0,0.

M CCA/Components/Schedulers/SchedulerCommon.cc

- Use 'const'.

M CCA/Ports/DataWarehouse.h

- Indent.
- In allocateTemporary(), you can't give a reference parameter (boundaryLayer) a default value. Not
sure why this compiles on other machines.

M Core/Grid/Patch.h

- White space cosmetics.

M Core/Grid/Variables/ParticleVariableBase.h
M Core/Grid/Variables/ParticleSubset.h

- Can't have a function differentiated only by return type (and particularly just by 'const' on the return type).
Not sure why other compiles allow this, and/or which function they actually 'link in', but the OSX 10 compiler
doesn't like it.

M Core/Grid/Variables/ReductionVariable_special.cc

- Don't compile some of these things under snow leopard.

M Core/Grid/Variables/ParticleVariableBase.cc

- Cosmetics.

M Core/Thread/Thread.cc

- Fix a warning for John. ;)

M Core/Disclosure/TypeUtils.cc

- 64 bit functions that become multiply defined if left in for Snow Leopard.

M Core/Util/Endian.cc

- White space!

M StandAlone/sub.mk

- Need Core/OS to link.

M StandAlone/tools/puda/varsummary.cc

- 64 bit overloaded function fix for OSX snow leopard.

M configure.ac

- OSX snow leopard fixes.
- NOTE: Not checking in configure because I don't have the correct autoconf version on this
machine. I will fix this in the next commit (coming shortly).

127 lines of code changed in 28 files:

  • configure.ac (+29 -19)
  • CCA/Components/Schedulers: OnDemandDataWarehouse.cc (+3 -2), OnDemandDataWarehouse.h (new), SchedulerCommon.cc (+3 -3), TaskGraph.cc (+14 -15), TaskGraph.h (+4 -4)
  • CCA/Ports: DataWarehouse.h (new)
  • Core/Disclosure: TypeUtils.cc (new)
  • Core/Grid: Patch.h (+5 -5)
  • Core/Grid/Variables: ParticleSubset.h (+4 -4), ParticleVariableBase.cc (new), ParticleVariableBase.h (+2 -2), ReductionVariable_special.cc (new)
  • Core/Thread: Thread.cc (+3 -2)
  • Core/Util: Endian.cc (+20 -18)
  • StandAlone: sub.mk (+1)
  • StandAlone/tools/puda: varsummary.cc (+4 -3)
  • include/sci_defs: osx_testdefs.h.in (new)
jthornoc 2009-11-02 17:17 Rev.: 45020

Dav: Indention is good too. :)

16 lines of code changed in 1 file:

  • CCA/Components/Models/Radiation: Models_DORadiationModel.cc (+16 -16)
jthornoc 2009-11-02 17:03 Rev.: 45019

Removed the extra initialization and moved the boundary condition evaluation until after the model is computed.
Also put back a default boolean for particle velocity model.

10 lines of code changed in 1 file:

  • CCA/Components/Arches/CoalModels: PartVel.cc (+10 -11)

(133 more)

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