Directory Packages/Uintah/CCA/Components/Arches/

Directory Deleted:
2009-03-09 15:15
Total Files:
0
Deleted Files:
85
Lines of Code:
0

[root]/Packages/Uintah/CCA/Components/Arches
                        Folder removed from repo Mixing (0 files, 0 lines)
                        Folder removed from repo Radiation (0 files, 0 lines)
                            Folder removed from repo fortran (0 files, 0 lines)
                        Folder removed from repo TabProps (0 files, 0 lines)
                        Folder removed from repo fortran (0 files, 0 lines)

Lines of Code

Packages/Uintah/CCA/Components/Arches/ Lines of Code

Developers

Author Changes Lines of Code Lines per Change
Totals 310 (100.0%) 3878 (100.0%) 12.5
jas 243 (78.4%) 2550 (65.8%) 10.4
charlesreid 11 (3.5%) 595 (15.3%) 54.0
harman 24 (7.7%) 424 (10.9%) 17.6
luitjens 11 (3.5%) 154 (4.0%) 14.0
jthornoc 18 (5.8%) 149 (3.8%) 8.2
dav 2 (0.6%) 6 (0.2%) 3.0
amorris 1 (0.3%) 0 (0.0%) 0.0

Most Recent Commits

jas 2009-03-09 15:15 Rev.: 43504

Remove Packages/

0 lines of code changed in 85 files:

  • Packages/Uintah/CCA/Components/Arches: Arches.cc (del), Arches.h (del), ArchesConstVariables.cc (del), ArchesConstVariables.h (del), ArchesLabel.cc (del), ArchesLabel.h (del), ArchesMaterial.cc (del), ArchesMaterial.h (del), ArchesVariables.cc (del), ArchesVariables.h (del), BoundaryCondition.cc (del), BoundaryCondition.h (del), CO2RateSrc.cc (del), CO2RateSrc.h (del), CellInformation.cc (del), CellInformation.h (del), CellInformationP.h (del), CompDynamicProcedure.cc (del), CompDynamicProcedure.h (del), CompLocalDynamicProcedure.cc (del), CompLocalDynamicProcedure.h (del), Discretization.cc (del), Discretization.h (del), EnthalpySolver.cc (del), EnthalpySolver.h (del), ExplicitSolver.cc (del), ExplicitSolver.h (del), ExtraScalarSolver.cc (del), ExtraScalarSolver.h (del), ExtraScalarSrc.cc (del), ExtraScalarSrc.h (del), ExtraScalarSrcFactory.cc (del), ExtraScalarSrcFactory.h (del), FakePetscSolver.cc (del), Filter.cc (del), Filter.h (del), HypreSolver.cc (del), HypreSolver.h (del), IncDynamicProcedure.cc (del), IncDynamicProcedure.h (del), LinearSolver.cc (del), LinearSolver.h (del), MixingRxnTable.cc (del), MixingRxnTable.h (del), MomentumSolver.cc (del), MomentumSolver.h (del), NonlinearSolver.cc (del), NonlinearSolver.h (del), OdtClosure.cc (del), OdtClosure.h (del), OdtData.cc (del), OdtData.h (del), PetscSolver.cc (del), PetscSolver.h (del), PhysicalConstants.cc (del), PhysicalConstants.h (del), PicardNonlinearSolver.cc (del), PicardNonlinearSolver.h (del), PressureSolver.cc (del), PressureSolver.h (del), Properties.cc (del), Properties.h (del), RHSSolver.cc (del), RHSSolver.h (del), ReactiveScalarSolver.cc (del), ReactiveScalarSolver.h (del), SO2RateSrc.cc (del), SO2RateSrc.h (del), ScalarSolver.cc (del), ScalarSolver.h (del), ScaleSimilarityModel.cc (del), ScaleSimilarityModel.h (del), SmagorinskyModel.cc (del), SmagorinskyModel.h (del), Source.cc (del), Source.h (del), StencilMatrix.h (del), TabPropsTable.cc (del), TabPropsTable.h (del), TimeIntegratorLabel.h (del), TurbulenceModel.cc (del), TurbulenceModel.h (del), ZeroExtraScalarSrc.cc (del), ZeroExtraScalarSrc.h (del), sub.mk (del)
jthornoc 2009-03-03 15:36 Rev.: 43381

Fixed a bug with prefill that was committed yesterday.

Also, commented out a couple of variables that were causing warnings because they were unused.

0 lines of code changed in 2 files:

  • Packages/Uintah/CCA/Components/Arches: BoundaryCondition.cc (changed)
jthornoc 2009-03-03 11:45 Rev.: 43376

Missed a boolean check for extra scalars.

13 lines of code changed in 1 file:

  • Packages/Uintah/CCA/Components/Arches: BoundaryCondition.cc (+13 -11)
jthornoc 2009-03-02 14:34 Rev.: 43367

- Added whitespace
- Removed the extra loop for extra scalars and put it in the main loop
- Added comments
- Changed the way we were checking to see if a point was inside the geometry
- Commented out the call to get_ramping_factor (wasn't being used)

No change in answers expected.

58 lines of code changed in 1 file:

  • Packages/Uintah/CCA/Components/Arches: BoundaryCondition.cc (+58 -62)
luitjens 2009-02-27 09:45 Rev.: 43356

Fixed a couple memory leaks.

0 lines of code changed in 4 files:

  • Packages/Uintah/CCA/Components/Arches: ArchesLabel.cc (changed), Properties.cc (new)
jthornoc 2009-02-26 16:51 Rev.: 43348

Added an interpolation of CC temperatures to FC temperatures.

Added a comment in Properties.cc

Added new label for FC temperatures.

13 lines of code changed in 6 files:

  • Packages/Uintah/CCA/Components/Arches: ArchesLabel.cc (+3), ArchesLabel.h (new), ExplicitSolver.cc (new), Properties.cc (+1 -1)
luitjens 2009-02-18 10:55 Rev.: 43267

Initialize a few more variables when boundary conditions are not specified.

4 lines of code changed in 1 file:

  • Packages/Uintah/CCA/Components/Arches: BoundaryCondition.cc (+4)
jthornoc 2009-02-17 23:08 Rev.: 43261

Changed prefill mechanism.

27 lines of code changed in 1 file:

  • Packages/Uintah/CCA/Components/Arches: BoundaryCondition.cc (+27 -18)
luitjens 2009-02-16 18:18 Rev.: 43250

More fixes for RT and input files.

7 lines of code changed in 4 files:

  • Packages/Uintah/CCA/Components/Arches: BoundaryCondition.cc (+2 -1), ExplicitSolver.cc (+2 -1), Source.cc (new)
luitjens 2009-02-16 17:08 Rev.: 43248

Handle the case where boundary conditions are not specified in the input file (uses defaults). We should discuss at homebrew if this is ideal or not but for now it should fix a few of the problems with RT.

132 lines of code changed in 1 file:

  • Packages/Uintah/CCA/Components/Arches: BoundaryCondition.cc (+132 -120)
dav 2009-02-12 16:34 Rev.: 43200


Turned on .ups validation... You need to update your .ups files and
the ups_spec.xml file now! If your problem specification is not
valid, sus will die (with an error message) immediately. You can
validate an .ups files with "sus -validate filename.ups".

M Core/Containers/StringUtil.h
M Core/Containers/StringUtil.cc

Utility function to print out a vector<string> as a single ',' separated string.

M Packages/Uintah/CCA/Components/MPM/PetscSolver.cc

* Comment.

M Packages/Uintah/Core/GeometryPiece/GeometryPieceFactory.cc
M Packages/Uintah/CCA/Components/SimulationController/SimulationController.cc

* Removed setting of writeMessages.

M Packages/Uintah/CCA/Components/Parent/ComponentFactory.h
M Packages/Uintah/CCA/Components/Parent/ComponentFactory.cc

* Don't pass in the name of (the type of) a component anymore... It is read from the .ups file now.

M Packages/Uintah/CCA/Components/Parent/Switcher.h

* Cosmetics

M Packages/Uintah/CCA/Components/Parent/Switcher.cc

* It is possible that I broke this... I think it is ok, but I'm going
to get this commit in so that the RT can take a look.
* Cosmetics
* Organize #includes.
* The ProblemSpec no longer comes from a port... Just hold onto it when Switcher is initialized.

M Packages/Uintah/CCA/Components/LoadBalancers/DynamicLoadBalancer.h

* Cosmetics - whitespace is your friend. :)

M Packages/Uintah/CCA/Components/LoadBalancers/DynamicLoadBalancer.cc

* Don't need two steps anymore to read a problem spec.

M Packages/Uintah/CCA/Components/DataArchiver/DataArchiver.cc

* Don't need two steps anymore to read a problem spec.

M Packages/Uintah/CCA/Components/Solvers/SolverFactory.cc

* <Solver>
<type>

replaced with:

<Solver type="">

M Packages/Uintah/CCA/Components/ProblemSpecification/ProblemSpecReader.h

* Major updates to ProblemSpec validation.
** Tracking the actual file that specific tags come from to better report errors to user.
** Don't 'create' a PSReader with a filename, just call readInputFile() with the filename.
Might should make readInputFile a static function, but haven't yet as I'm not sure
if it is used multiple times for the same ProbSpec.
** Prob Spec Reader now contains a list of all (xml) files that were read to create the PS.
* Functions used to pass in the tag (parent), but since they are part of the tag class, don't need
to do this. It is implicitly done (parent == this).
* Moved the Tag/Attribute structs out of the ProblemSpecReader class as they aren't really
a part of it, and are not needed anywhere but in ProblemSpecReader.cc.

* Remove #include sgi stuff.

M Packages/Uintah/CCA/Components/ProblemSpecification/ProblemSpecReader.cc

* Display filename and line number when errors are found.
** All tags are added to the main (top level) xml 'doc'ument. Because of this, the filename
of sub-docs was lost. I am catching this and using the *_private (part of an xml node)
to hold onto this info. I think this is ok as the xml documentation says that it is for
application use.

* Added need_applies_to and children requirements parsing.
* Fixed a couple of edge condition errors that could slip through the parsing.
* Consolidate the file name validation. First look for the file specified directly,
then look for it as a relative offest from its parents location,
then look for it as an absolute offset from where the program was run.
I think this covers all the cases that people use and that it makes sense
to do it this way.

M Packages/Uintah/CCA/Components/Arches/Arches.cc

* Made 'whichMMS' an attribute (instead of a separate <Tag>).

M Packages/Uintah/CCA/Components/Regridder/RegridderFactory.cc

* Changed <type> to be an attribute of <Regridder type="">.

M Packages/Uintah/CCA/Ports/ProblemSpecInterface.h

* Pass filename into readInputFile().
* Cosmetics

M Packages/Uintah/scripts/regression_tester

* Allow 'inputs' to be INPUTS to be local as well as in relative src location.

M Packages/Uintah/Core/DataArchive/DataArchive.cc

* One stop readInputFile().
* Catch edge error condition. (d_filebase == "")

M Packages/Uintah/Core/ProblemSpec/ProblemSpec.h

* Removed doWrite... as it wasn't (really) used anywhere, and I'm not sure what its purpose was.
* Cosmetics - whitespace is your friend

M Packages/Uintah/Core/ProblemSpec/ProblemSpec.cc

* Cosmetics - use '{}' and whitespace.
* removed d_write

M Packages/Uintah/StandAlone/tools/compare_mms/compare_mms.cc
M Packages/Uintah/StandAlone/tools/graphview/GV_TaskGraph.cc
M Packages/Uintah/StandAlone/slb.cc
M Packages/Uintah/StandAlone/restart_merger.cc

* One stop readInputFile()

M Packages/Uintah/StandAlone/tools/pfs/pfs.cc
M Packages/Uintah/StandAlone/tools/pfs/pfs2.cc

* One stop readInputFile()
* Removed writeMessages()... don't think it is used anywhere...

M Packages/Uintah/StandAlone/sus.cc

* Clean up 'usage'.
* No more "-mpm" or "-arches", etc... Specify in .ups file.
* FinalizeManager (finalize MPI) was needed in a number of error cases.

M Packages/Uintah/StandAlone/inputs/ups_spec.xml

Lots of updates... Needs a lot more work from those in the know.
Please fix all the FIXMEs. If a parameter is optional, please specify
why and/or its default. Also, make as many things 'REQUIRED' as
possible. Update the children and need_applies_to flags too.

Please put <tags> in ALPHABETICAL order... this will make it much
easier to find and verify them! Try to organize the large <tags> in
sections (as they apply to need_applies_to), but keep each section
alphabetical.

M Packages/Uintah/StandAlone/inputs/*/*.ups

* Updates to be closer to spec.

6 lines of code changed in 2 files:

  • Packages/Uintah/CCA/Components/Arches: Arches.cc (new)
jthornoc 2009-02-11 18:14 Rev.: 43189

RMCRTRadiationModel is now calling Paula's stand-alone solver.

Currently there is no passing of variables from the DW to the solver. This is to come shortly.

Also, I wasn't quite sure where exactly to put this task. We might want to change it around in the future
if we want a stand-alone solution only. Otherwise, it may make most sense to keep it after (or even in)
the property calculation.

23 lines of code changed in 3 files:

  • Packages/Uintah/CCA/Components/Arches: ExplicitSolver.cc (+18), ExplicitSolver.h (new)
luitjens 2009-02-11 11:38 Rev.: 43182

Fixed a reference counted object problem. Removed a memory leak.

11 lines of code changed in 1 file:

  • Packages/Uintah/CCA/Components/Arches: Properties.cc (+11 -1)
charlesreid 2009-02-10 14:06 Rev.: 43170

Updating Arches TabPropsTable table reader & calls to TabPropsTable table reader in Properties class
(Also updating ups_spec.xml to include the relevant options in the input file)
The new TabPropsTable table reader has not been tested yet, but I want to get all the changes under version control.
(This commit won't change the way the current Arches code runs or reads tables - this change will come after testing).

439 lines of code changed in 7 files:

  • Packages/Uintah/CCA/Components/Arches: Properties.cc (+186 -79), Properties.h (+25 -6), TabPropsTable.cc (+175 -155), TabPropsTable.h (+53 -34)
jthornoc 2009-01-26 17:59 Rev.: 42982

Starting a simple interface for Paula's RMCRTing code.

There are a lot of comments in here to help Paula get going.

R stands for Reverse (Monte Carlo Ray Tracing)


0 lines of code changed in 2 files:

  • Packages/Uintah/CCA/Components/Arches: sub.mk (new)
jas 2009-01-26 13:49 Rev.: 42976

Add the MIT License to every *.cc, *.h,*.F, and sub.mk file.

2550 lines of code changed in 158 files:

  • Packages/Uintah/CCA/Components/Arches: Arches.cc (+30), Arches.h (+30), ArchesConstVariables.cc (+30), ArchesConstVariables.h (+30), ArchesLabel.cc (+30), ArchesLabel.h (+30), ArchesMaterial.cc (+30), ArchesMaterial.h (new), ArchesVariables.cc (+30), ArchesVariables.h (+30), BoundaryCondition.cc (+30), BoundaryCondition.h (+30), CO2RateSrc.cc (+30), CO2RateSrc.h (+30), CellInformation.cc (+30), CellInformation.h (+30), CellInformationP.h (+30), CompDynamicProcedure.cc (new), CompDynamicProcedure.h (+30), CompLocalDynamicProcedure.cc (+30), CompLocalDynamicProcedure.h (+30), Discretization.cc (+30), Discretization.h (+30), EnthalpySolver.cc (+30), EnthalpySolver.h (+30), ExplicitSolver.cc (+30), ExplicitSolver.h (+30), ExtraScalarSolver.cc (new), ExtraScalarSolver.h (new), ExtraScalarSrc.cc (+30), ExtraScalarSrc.h (new), ExtraScalarSrcFactory.cc (+30), ExtraScalarSrcFactory.h (new), FakePetscSolver.cc (new), Filter.cc (new), Filter.h (new), HypreSolver.cc (new), HypreSolver.h (+30), IncDynamicProcedure.cc (new), IncDynamicProcedure.h (new), LinearSolver.cc (new), LinearSolver.h (+30), MixingRxnTable.cc (+30), MixingRxnTable.h (new), MomentumSolver.cc (+30), MomentumSolver.h (+30), NonlinearSolver.cc (new), NonlinearSolver.h (+30), OdtClosure.cc (new), OdtClosure.h (+30), OdtData.cc (+30), OdtData.h (+30), PetscSolver.cc (+30), PetscSolver.h (+30), PhysicalConstants.cc (new), PhysicalConstants.h (+30), PicardNonlinearSolver.cc (new), PicardNonlinearSolver.h (+30), PressureSolver.cc (+30), PressureSolver.h (new), Properties.cc (+30), Properties.h (+30), RHSSolver.cc (+30), RHSSolver.h (new), ReactiveScalarSolver.cc (+30), ReactiveScalarSolver.h (+30), SO2RateSrc.cc (+30), SO2RateSrc.h (new), ScalarSolver.cc (new), ScalarSolver.h (new), ScaleSimilarityModel.cc (+30), ScaleSimilarityModel.h (new), SmagorinskyModel.cc (new), SmagorinskyModel.h (new), Source.cc (+30), Source.h (new), StencilMatrix.h (new), TabPropsTable.cc (+30), TabPropsTable.h (+30), TimeIntegratorLabel.h (+30), TurbulenceModel.cc (+30), TurbulenceModel.h (+30), ZeroExtraScalarSrc.cc (new), ZeroExtraScalarSrc.h (new), sub.mk (+30)
amorris 2009-01-22 17:42 Rev.: 42951


Fixing up the change in r42788

MomentumSolver.cc
buildLinearMatrixVelHat()
- removed Tau timing statements.

the stop call was remaining.


0 lines of code changed in 1 file:

  • Packages/Uintah/CCA/Components/Arches: MomentumSolver.cc (-2)
jthornoc 2009-01-22 17:36 Rev.: 42950

Fixed a bug in the error calculation for the v-component of velocity and cleaned things up.

15 lines of code changed in 1 file:

  • Packages/Uintah/CCA/Components/Arches: ExplicitSolver.cc (+15 -23)
charlesreid 2009-01-20 10:26 Rev.: 42913

Adding header files for file-checking and proc0cout

16 lines of code changed in 1 file:

  • Packages/Uintah/CCA/Components/Arches: TabPropsTable.cc (+16 -44)
charlesreid 2009-01-18 18:40 Rev.: 42908

Fixing formatting in MixingRxnTable; modifying getState method and cleaning up comments in TabPropsTable class

140 lines of code changed in 3 files:

  • Packages/Uintah/CCA/Components/Arches: MixingRxnTable.h (+22 -4), TabPropsTable.cc (+117 -60), TabPropsTable.h (+1 -3)

(11 more)

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