The NIH/NIGMS
Center for Integrative Biomedical Computing

SCI Publications

2007


J.K. Triedman, M. Jolley, R.S. MacLeod, J.G. Stinstra, D.H. Brooks, S. Pieper. “A System for Image Based Finite Element Modeling of Novel Defibrillation Strategies,” In Life Science Systems and Applications Workshop, 2007. LISA 2007, pp. 63--66. 2007.



J.K. Triedman, M. Jolley, R.S. MacLeod, J. Stinstra, D.H. Brooks, S. Pieper. “Finite Element Modeling of Novel Defibrillation Approaches in Children and Adults,” In Proc. LISSA Conf., Bethesda, MD, November, 2007.



S.X. Vasquez, A.N. Bahadur, J.T. Johnson III, D.R. Rodriguez, C. Keller. “Severe Runting of a Laboratory Mouse (Mus musculus),” In Lab Animal, Vol. 36, No. 1, pp. 19, 22--23. January, 2007.



C.H. Wolters, H. Köstler, C. Möller, J. Härtlein, L. Grasedyck, W. Hackbusch. “Numerical Mathematics of the Subtraction Method for the Modeling of a Current Dipole in EEG Source Reconstruction Using Finite Element Head Models,” In SIAM J. on Scientific Computing, Vol. 30, No. 1, pp. 24--45. 2007.



C.H. Wolters, H. Köstler, C. Möller, J. Härdtlein, A. Anwander. “Numerical Approaches for Dipole Modeling in Finite Element Method Based Source Analysis,” In New Frontiers in Biomagnetism. Proceedings of the 15th International Conference on Biomagnetism, Vancouver, BC, Canada, August 21-25, 2006., International Congress Series, Vol. 1300, pp. 189--192. June, 2007.



B. Yihnaz, R.S. MacLeod, B.B. Punske, B. Taccardi, and D.H. Brooks. “Generalized training subset selection for statistical estimation of epicardial activation maps from intravenous catheter measurements,” In Compo in BioI. and Med., In Compo in BioI. and Med., Vol. 37, No. 3, pp. 328--336. 2007.



B. Yilmaz, R.S. MacLeod. “Generalized Training Subset Selection for Statistical Estimation of Epicardial Activation Maps from Intravenous Catheter Measurements,” In Computers in Biology and Medicine, Vol. 37, No. 9, pp. 328--336. March, 2007.


2006


G. Adluru, E.V.R. DiBella, R.T. Whitaker. “Automatic Segmentation of Cardiac Short Axis Slices in Perfusion MRI,” In Proceedings of The 2006 IEEE International Symposium on Biomedical Imaging, pp. 133--136. 2006.



G. Adluru, E.V.R. DiBella. “Segmentation Based Registration of Myocardium in Cardiac Perfusion Images,” In Proceedings of The 14th Annual Scientific Meeting of The International Society for Magnetic Resonance in Medicine (ISMRM), Vol. 14, pp. 1223. 2006.



R. Armstrong, G. Kumfert, L.C. McInnes, S.G. Parker, B. Allan, M. Sottile, T. Epperly, T. Dahlgren. “The CCA Component Model for High-Performance Scientific Computing,” In Concurrency and Computation: Practice & Experience, Vol. 18, No. 2, John Wiley and Sons Ltd., Chichester, UK pp. 215--229. 2006.
ISSN: 1532-0626



S.P. Awate, T. Tasdizen, R.T. Whitaker. “Unsupervised Texture Segmentation with Nonparametric Neighborhood Statistics,” SCI Institute Technical Report, No. UUSCI-2006-011, University of Utah, 2006.



S.P. Awate, R.T. Whitaker. “Unsupervised, Information-Theoretic, Adaptive Image Filtering for Image Restoration,” In IEEE Trans. Pattern Anal. & Mach. Intel., Vol. 28, No. 3, pp. 364--376. March, 2006.
PubMed ID: 16526423



S. Babaeizadeh, D.H. Brooks. “Imaging Error from Mislocation of Surface Sensors: Sensitivity, Detection, and Estimate Correction, with Application to EIT,” In Proceedings of the IEEE International Conference on Acoustics, Speech, and Signal Processing, Toulouse, France May, 2006.



S. Browd, L.J. Healy, G. Dobie, J.T. Johnson III, G.M. Jones, L.F. Rodriguez, D.L. Brockmeyer. “Morphometric and Qualitative Analysis of Congenital Occipitocervical Instability in Children: Implications for Down Syndrome Patients,” In Journal of Neurosurgery: Pediatrics, Vol. 105, No. 1 , Journal of Neurosurgery Publishing Group, pp. 50--54. July, 2006.
DOI: 10.3171/ped.2006.105.1.50



J. Cates, D. Weinsten, M. Davis. “The Center for Integrative Biomedical Computing: Advancing Biomedical Science with Open Source,” In Proceedings of the IEEE International Symposium on Biomedical Imaging (ISBI) 2006, 2006.



A. Ghodrati, D.H. Brooks, G. Tadmor, R.S. MacLeod. “Wavefront-based Models for Inverse Electrocardiography,” In IEEE Trans Biomed. Eng., Vol. 53, No. 9, pp. 1821--1831. 2006.
DOI: 10.1109/TBME.2006.878117



A. Ghodrati, D.H. Brooks, G. Tadmor, R.S. MacLeod. “Lead Selection for Inverse Electrocardiography,” In IEEE Trans Biomed. Eng., pp. in press. 2006.



A. Ghodrati, A. Keely, G. Tadmor, R.S. MacLeod, D.H. Brooks. “A Wavefront-Based Constraint for Potential Surface Solutions in Inverse Electrocardiography,” In 2006 International Conference of the IEEE Engineering in Medicine and Biology Society, IEEE, New York, NY, USA August, 2006.
DOI: 10.1109/IEMBS.2006.260373



A. Ghodrati, D.H Brooks, G. Tadmor, R.S. MacLeod. “A Threshold-Based Method for Inverse Solutions to Reconstruct Complex Obstacles, with Application to the Inverse Problem of Electrocardiography,” In SIAM Conference on Imaging Science, Minneapolis, MN, USA May, 2006.



C.R. Johnson, D.M. Weinstein. “Biomedical Computing and Visualization,” In Proceedings of the Twenty-Ninth Australasian Computer Science Conference (ACSC2006): Conferences in Research and Practice in Information Technology (CRPIT), Hobart, Australia, Vol. 48, Edited by Vladimir Estivill-Castro and Gill Dobbie, pp. 3-10. 2006.