Designed especially for neurobiologists, FluoRender is an interactive tool for multi-channel fluorescence microscopy data visualization and analysis.
Deep brain stimulation
BrainStimulator is a set of networks that are used in SCIRun to perform simulations of brain stimulation such as transcranial direct current stimulation (tDCS) and magnetic transcranial stimulation (TMS).
Developing software tools for science has always been a central vision of the SCI Institute.

SCI Publications

1998


 C.D. Hansen. “EUROGRAPHICS '97 Conference Report,” In Computer Graphics Quarterly, Vol. 32, No. 1, pp. 39. February, 1998.


C.D. Hansen. “EUROGRAPHICS '97: Budapest, Hungary, September 4-8, 1997: Meeting Report,” In Computer Graphics Forum, Vol. 16, No. 5, pp. 323--324. February, 1998.


Y. Livnat, C.D. Hansen. “View Dependent Isosurface Extraction,” In IEEE Visualization '98, pp. 175--180. Oct, 1998.


M. Miller, C.D. Hansen, C.R. Johnson. “Simulation Steering with SCIRun in a Distributed Memory Environment,” In Lecture Notes in Computer Science, Springer-Verlag, In Applied Parallel Computing, 4th International Workshop, PARA'98, Lecture Notes in Computer Science, Vol. 1541, Edited by B. Kagstrom and J. Dongarra and E. Elmroth and J. Wasniewski, Springer-Verlag, Berlin pp. 366--376. 1998.


M. Miller, C.D. Hansen, S.G. Parker, C.R. Johnson. “Simulation Steering with SCIRun in a Distributed Memory Environment,” In Seventh IEEE International Symposium on High Performance Distributed Computing (HPDC-7), Jul, 1998.


S.G. Parker, P. Shirley, Y. Livnat, C.D. Hansen, P.-P. Sloan. “Interactive Ray Tracing for Isosurface Extraction,” In IEEE Visualization '98, pp. 233--238. October, 1998.


S.G. Parker, M. Miller, C.D. Hansen, C.R. Johnson, P.-P. Sloan. “An Integrated Problem Solving Environment: The SCIRun Computational Steering System,” In 31st Hawaii International Conference on System Sciences (HICSS-31), Vol. VII, Edited by H. El-Rewini, pub-IEEE, pp. 147--156. January, 1998.

1997


 C.D. Hansen, M. Krogh, J. Painter. “Parallel Rendering Techniques for Massively Parallel Visualization,” In International Symposium on Parallel Algorithms/Architecture Synthesis, Aizu-Wakamatsu, Japan, pp. 276--281. March, 1997.


M. Krogh, J. Painter, C.D. Hansen. “Parallel Sphere Rendering,” In Parallel Computing, Vol. 23, No. 7, pp. 961--974. 1997.

1996


 J. Painter, M. Krogh, C.D. Hansen. “Parallel Sphere Rendering,” In EUROGRAPHICS Workshop on Parallel Graphics and Visualization, Bristol, England, September, 1996.


H.W. Shen, C.D. Hansen, Y. Livnat, C.R. Johnson. “Isosurfacing in Span Space with Utmost Efficiency,” In IEEE Visualization `96, IEEE Press, pp. 287--294. 1996.

1995


 J. Ahrens, C.D. Hansen. “Cost-Effective Data-Parallel Load Balancing,” In International Conference on Parallel Processing, Oconomowoc, Wi., pp. 14--18. August, 1995.


C.D. Hansen, G.C. de Verdiere, M. Krogh, J. Painter, R. Troutman. “Binary-Swap Volumetric Rendering on the T3D,” In Cray Users Group Conference, Denver, Co., pp. 61--69. March, 1995.


C.D. Hansen, M. Krogh, W. White. “Massively Parallel Visualization: Parallel Rendering,” In SIAM Parallel Computation Conference, San Francisco, Ca., pp. 790--795. February, 1995.


J. Painter, P. McCormick, M. Krogh, C.D. Hansen, G.C. de Verdiere. “ACLMPL: Portable and Efficient Message Passing for MPPs,” In First European T3D User's Group Workshop, Lausanne Switzerland, pp. 4--10. November, 1995.


R. Troutman, C.D. Hansen. “Binary-Swap Shear-Warp Volume Renderer on the T3D,” In Cray Users Group Conference, Fairbanks, Ak., pp. 93--102. September, 1995.


W.B. Tung, C.D. Hansen, D.R. Jones, W.H. Chen, H.A. Al-Sunaidi. “Development of an Interactive Reservoir Simulation and Visualization System for a Massively Parallel Processor,” In 5th ARCHIE Conference: Visualization Technology to Find and Develop more Oil and Gas, The Woodlands, Texas, Note: Refereed abstract., pp. 105--107. May, 1995.

1994


 S. Adelson, C.D. Hansen. “Fast Stereoscopic Images with Ray-Traced Volume Rendering,” In Symposium on Volume Visualization, Washington, DC., pp. 3--9. October, 1994.


C.D. Hansen T.Crockett, S. Whitman. “Parallel Rendering,” In IEEE Parallel and Distributed Technology, Vol. 2, No. 2, Note: Guest editors' introduction, pp. 7. Summer, 1994.


K.L. Ma, J. Painter, C.D. Hansen, M. Krogh. “Parallel Volume Rendering Using Binary-Swap Compositing,” In IEEE Computer Graphics and Applications, Vol. 14, No. 4, pp. 59--68. 1994.