December 2015 Commit Log

Number of Commits:
87
Number of Active Developers:
11
harman 2015-12-29 19:04 Rev.: 54601

Clean out surpurflous #includes using google:include-what-you-use tool

All mpm nightly local RT tests passed


0 lines of code changed in 50 files:

harman 2015-12-29 17:22 Rev.: 54598

Clean out surpurflous #include

All mpm nightly local RT tests passed


0 lines of code changed in 18 files:

harman 2015-12-29 15:59 Rev.: 54597

Used the google tool include-what-you-use to clean up
the #includes.

0 lines of code changed in 4 files:

harman 2015-12-29 11:05 Rev.: 54596

added:
- fineLevelCFI_Patches()
This returns fine patches with a CFI and any coarse patches below it.

- removeDuplicates( Level::selectType& array )
Removes any duplicate patches in array. This belongs in Core/Grid/fixedVector.h

ComputeZoneOfInfluence()
- using the above methods simplified the logic tree by eliminating conditionals.

This shouldn't change the answers.


210 lines of code changed in 2 files:

harman 2015-12-28 17:50 Rev.: 54595

fixed () bug that was kicked up by Allen S.

0 lines of code changed in 2 files:

allen 2015-12-23 14:55 Rev.: 54592

added a barrier and white space cleanup

0 lines of code changed in 4 files:

allen 2015-12-23 14:16 Rev.: 54591

added destroy calls

3 lines of code changed in 1 file:

jsutherland 2015-12-23 08:28 Rev.: 54590

Move ExprLib back to the latest version.

NOTE: This will break a few of the Wasatch regression tests. The GS will be updated tomorrow.

0 lines of code changed in 2 files:

jas 2015-12-22 18:04 Rev.: 54589

Add back in the Z_LIBRARY

0 lines of code changed in 2 files:

allen 2015-12-22 16:57 Rev.: 54588

added support to block for async calls

0 lines of code changed in 8 files:

jas 2015-12-22 15:57 Rev.: 54587

Remove extra Z_LIBRARY references.

24 lines of code changed in 43 files:

allen 2015-12-21 17:07 Rev.: 54586

added new lbisim functionality

320 lines of code changed in 8 files:

allen 2015-12-21 17:07 Rev.: 54585

more additions to support libsim

0 lines of code changed in 2 files:

allen 2015-12-21 17:06 Rev.: 54584

white and grammar cleanup

0 lines of code changed in 2 files:

allen 2015-12-21 16:54 Rev.: 54582

added additional vars for state changes

26 lines of code changed in 3 files:

allen 2015-12-21 16:46 Rev.: 54581

added new output ports

0 lines of code changed in 2 files:

allen 2015-12-21 16:46 Rev.: 54580

added asyncronious saving of a data and checkpoints and a bunch of white space clean up

400 lines of code changed in 3 files:

jsutherland 2015-12-21 09:15 Rev.: 54579

For now, set ExprLib to a specific version while we nail down why a recent change is causing diffs.

2 lines of code changed in 1 file:

jas 2015-12-18 13:57 Rev.: 54574

Revert tiff removal.

1529 lines of code changed in 10 files:

jas 2015-12-18 13:33 Rev.: 54572

Remove the jpeg, tiff (old SCIRun) and traceback libraries (old SGI). Remove dependencies on Z_LIBRARY that are not needed in certain Uintah libraries.

3 lines of code changed in 7 files:

jsutherland 2015-12-17 14:12 Rev.: 54567

Remove an unnecessary line of code.

0 lines of code changed in 2 files:

jsutherland 2015-12-17 14:12 Rev.: 54566

Consolidate some code - implement inline rather than splitting it out in the header.

0 lines of code changed in 26 files:

guilkey 2015-12-17 11:11 Rev.: 54563

Cleaning up #if 0ed out code, adding comments to what remains.

13 lines of code changed in 1 file:

dav 2015-12-16 17:01 Rev.: 54560

Point to both lib and include for boost (for use when they are separated)

0 lines of code changed in 2 files:

harman 2015-12-16 16:53 Rev.: 54559

take the keyboard away!

1 lines of code changed in 1 file:

tsaad 2015-12-16 15:53 Rev.: 54557

Fix a very subtle bug in the compressible algorithm. The bug was due to the poorly designed interface for constructing diffusive fluxes when the old variable density algorithm was being used. This should address the failures that were "randomly" taking place on the RT machine. We may still have to rebless the GS since this commit will change answers.

18 lines of code changed in 7 files:

harman 2015-12-16 15:14 Rev.: 54556

This should have been added to the last commit

2 lines of code changed in 2 files:

harman 2015-12-16 15:05 Rev.: 54554

debug_CFI_experimental()
- final update before it's tossed in the trash and we start over.

coarseLevelCFI_Patches()
- Now returning the CFI_coarsePatches and CFI_finePatches

coarsenNodalData_CFI*()
- using CFI_finePatches from coarseLevelCFI_Patches() call. This simplifies
the mumbo and the jumbo slightly.

* This commit should not change the answers.

53 lines of code changed in 1 file:

harman 2015-12-16 12:01 Rev.: 54553

Added 1D, 3 level, advection test to nightly RT. Particles are moving across the CFI and
leaving the domain.


0 lines of code changed in 2 files:

harman 2015-12-15 18:51 Rev.: 54551

Moved all AMRMPM tests into their own array/list AMRTESTS. Allows user to just run those tests.

65 lines of code changed in 1 file:

derekhar 2015-12-14 23:27 Rev.: 54550

Reverting commit 54488 and 54487 which were causing crashes on Mira, probably due to a poorly condition matrix.

0 lines of code changed in 4 files:

u0407585 2015-12-14 19:45 Rev.: 54546

Added if statement to CoalTemperature problemSetup to avoid computing coefficients for an enthalpy curve fit if we are not using that part of the model.

47 lines of code changed in 1 file:

tsaad 2015-12-14 06:18 Rev.: 54543

add regression tests for compressible flow.

0 lines of code changed in 2 files:

tsaad 2015-12-12 09:50 Rev.: 54540

fix the Wasatch RT

3 lines of code changed in 1 file:

harman 2015-12-11 15:41 Rev.: 54536

Added a sandbox task ( debug_CFI_experimental()) to experiment with getParticleSubsetAllLevels()

155 lines of code changed in 2 files:

jsutherland 2015-12-11 11:37 Rev.: 54534

Remove a few superfluous "typename" declarations that were causing problems on mira.

6 lines of code changed in 1 file:

jsutherland 2015-12-11 10:43 Rev.: 54533

Silence a few more warnings coming out of g++.

15 lines of code changed in 6 files:

jsutherland 2015-12-11 10:21 Rev.: 54532

Consolidate functors and overload evaluate() in TabPropsEvaluator

0 lines of code changed in 2 files:

jsutherland 2015-12-11 10:21 Rev.: 54531

Misc. cleanup.

0 lines of code changed in 6 files:

tsaad 2015-12-11 05:52 Rev.: 54530

remove a typename outside of template. This was causing compilation problems on MIRA.

1 lines of code changed in 1 file:

harman 2015-12-10 17:11 Rev.: 54524

Added a user defined clamp to the internal src regions. The value of the scalar can't exceed (X).


0 lines of code changed in 4 files:

jsutherland 2015-12-10 15:17 Rev.: 54522

Silence some compiler warnings.

15 lines of code changed in 8 files:

allen 2015-12-10 14:47 Rev.: 54521

added mpi stats

76 lines of code changed in 3 files:

jsutherland 2015-12-10 14:47 Rev.: 54520

Minor cleanup on some particle stuff.

60 lines of code changed in 3 files:

jsutherland 2015-12-10 14:47 Rev.: 54519

Remove some superfluous "typename" stuff.

0 lines of code changed in 2 files:

tsaad 2015-12-10 11:28 Rev.: 54517

First cut at a fully functional compressible flow solver in Wasatch.
1. Uses a collocated grid arrangement
2. Current supports a calorically perfect gas only
3. No shock capturing since the algorithm is intended for low-Mach simulations when preconditioning is implemented
4. Look at the two input files: compressible-flow-test-1d and compressible-flow-test-2d for examples
5. RT will be added soon

689 lines of code changed in 31 files:

allen 2015-12-09 17:34 Rev.: 54516

white space clean up

171 lines of code changed in 1 file:

allen 2015-12-09 17:25 Rev.: 54515

added a access method for AMR

0 lines of code changed in 2 files:

allen 2015-12-09 17:19 Rev.: 54514

clean up of teh libsim

436 lines of code changed in 4 files:

allen 2015-12-09 16:59 Rev.: 54513

correct grid assignment and white space cleanup

12 lines of code changed in 3 files:

tsaad 2015-12-09 15:34 Rev.: 54511

Fix failing wasatch build due to removing a "using SCIRun::IntVector" from a header file upstream.

9 lines of code changed in 9 files:

harman 2015-12-09 14:29 Rev.: 54510

cosmetics:
-added {}
-added dividers
- removed "insert documentaion" lines.
- prune #includes.

0 lines of code changed in 4 files:

harman 2015-12-09 11:24 Rev.: 54509

debugCFI task:
pull psize from the old_dw.

added dividers


42 lines of code changed in 1 file:

leavy 2015-12-09 10:30 Rev.: 54508

improved file geometry import and manufactured solutions compatibility

55 lines of code changed in 3 files:

tsaad 2015-12-09 10:06 Rev.: 54507

get rid of the "suffix" argument when setting up convective flux. Introducing the suffix was a bad design decision.

10 lines of code changed in 9 files:

tsaad 2015-12-07 16:42 Rev.: 54501

add a static variable that allows us to detect the type of treatment used for the fluid dynamics (lowMach vs Incompressible). This is necessary to help us identify when to pass Uintah solver information to the pressure.

20 lines of code changed in 4 files:

tsaad 2015-12-07 16:18 Rev.: 54500

Change the Wasatch namespace to WasatchCore to avoid conflicts with the Wasatch class.

397 lines of code changed in 226 files:

harman 2015-12-07 11:39 Rev.: 54495

Clean up some inconsistencies that I've allowed to exist for 10+ years.
The ups spec for models is now

<Model type = "ZeroModel">
</ZeroModel>
</ZeroModel>
</Model>
There is more cleaning to do. This commit should not change the answers

0 lines of code changed in 2 files:

harman 2015-12-07 11:19 Rev.: 54493

Clean up some inconsistencies that I've allowed to exist for 10+ years.
The ups spec for models is now

<Model type = "DDT0">
</DDT0>
</DDT0>
</Model>
There is more cleaning to do. This commit should not change the answers


0 lines of code changed in 2 files:

harman 2015-12-07 10:54 Rev.: 54491

Clean up some inconsistencies that I've allowed to exist for 10+ years.
The ups spec for models is now

<Model type = "Simple_Burn">
<Simple_Burn>
</Simple_Burn>
</Model>
There is more cleaning to do. This commit should not change the answers

0 lines of code changed in 2 files:

derekhar 2015-12-05 10:52 Rev.: 54488

Adjust nomenclature to be consistent.

5 lines of code changed in 1 file:

derekhar 2015-12-04 19:35 Rev.: 54487

Added the option to use a curve fit for particle enthalpy, rather than using non-linear solve. This is needed so that the temperature field can be characterized in terms for enthalpy for equilibrium models.

192 lines of code changed in 2 files:

harman 2015-12-04 18:18 Rev.: 54484

Clean up some inconsistencies that I've allowed to exist for 10+ years.
The ups spec for models is now

<Model type = "JWLpp">
<JWLpp>
</JWLpp>
</Model>
There is more cleaning to do. This commit should not change the answers.

0 lines of code changed in 2 files:

harman 2015-12-04 17:25 Rev.: 54481

removed redundant test. The main difference between this test and DDT.ups is the
semi-implicit pressure solve.

0 lines of code changed in 2 files:

harman 2015-12-04 17:10 Rev.: 54479

If
SCI_DEBUG ExecTimes:+
is set output the exectimes files.

0 lines of code changed in 4 files:

allen 2015-12-04 16:51 Rev.: 54478

removed extra vars

0 lines of code changed in 1 file:

allen 2015-12-04 16:46

include cleanup

12 lines of code changed in 3 files:

allen 2015-12-04 16:35 Rev.: 54475

split the libsim library

2225 lines of code changed in 7 files:

harman 2015-12-04 15:40 Rev.: 54474

try a different method for resetting the environmental variable

0 lines of code changed in 2 files:

allen 2015-12-04 10:47 Rev.: 54473

added an exist check

25 lines of code changed in 1 file:

harman 2015-12-03 17:39 Rev.: 54469

Clean up some inconsistencies that I've allowed to exist for 10+ years.
The ups spec for models is now

<Model type = "Unsteady_Burn">
<Unsteady_Burn>
</Unsteady_Burn>
</Model>
There is more cleaning to do. This commit should not change the answers.


0 lines of code changed in 2 files:

harman 2015-12-03 17:28 Rev.: 54468

Clean up some inconsistencies that I've allowed to exist for 10+ years.
The ups spec for models is now

<Model type = "Steady_Burn">
<Steady_Burn>
</Steady_Burn>
</Model>
There is more cleaning to do. This commit should not change the answers.

0 lines of code changed in 2 files:

harman 2015-12-03 16:22 Rev.: 54467

Clean up some inconsistencies that I've allowed to exist for 10+ years.
The ups spec for models is now

<Model type = "AdiabaticTable">
<X model>
</ X model>
</Model>
There is more cleaning to do. This commit should not change the answers.

7 lines of code changed in 1 file:

tsaad 2015-12-03 16:06 Rev.: 54466

Get the strain tensor and convective fluxes to properly hook up to the compressible momentum equations.
Segregate the common features of momentum transport for an easier implementation of the compressible algorithm.

320 lines of code changed in 15 files:

harman 2015-12-03 16:00 Rev.: 54465

Clean up some inconsistencies that I've allowed to exist for 10+ years.
The ups spec for models is now

<Model type = "AdiabaticTable">
<X model>
</ X model>
</Model>
There is more cleaning to do. This commit should not change the answers.

0 lines of code changed in 2 files:

harman 2015-12-03 15:03 Rev.: 54464

Clean up some inconsistencies that I've allowed to exist for 10+ years.
The ups spec for models is now

<Model type = "LightTime">
<X model>
</ X model>
</Model>
There is more cleaning to do. This commit should not change the answers.

0 lines of code changed in 6 files:

harman 2015-12-02 14:57 Rev.: 54460

merge from Genesis.2 branch.
User can now add geometry object(s) to inject a passive scalar in the interior of the domain.

147 lines of code changed in 2 files:

guilkey 2015-12-02 13:29 Rev.: 54457

Remove tabs

14 lines of code changed in 1 file:

allen 2015-12-02 12:03

added messages to the libsim

159 lines of code changed in 2 files:

allen 2015-12-02 11:57 Rev.: 54453

white space clean up

5 lines of code changed in 1 file:

tsaad 2015-12-02 10:43 Rev.: 54451

1. Simplify the momentum transport equation base class
2. Derive the Compressible momentum transport equation from the aforementioned base class

22 lines of code changed in 5 files:

jsutherland 2015-12-01 17:02 Rev.: 54446

Change how we deal with per-patch variables in Wasatch field bindings.
The framework is currently a bit sketchy on how it handles these, and Brad is working to fix that...

3 lines of code changed in 1 file:

tsaad 2015-12-01 17:00 Rev.: 54445

Generalize the turbulence closure models to handle a collocated grid arrangement.
Also cleanup some warnings.

235 lines of code changed in 12 files:

tsaad 2015-12-01 16:25 Rev.: 54443

must use absolute path for gpu build to work

1 lines of code changed in 1 file:

tsaad 2015-12-01 15:50 Rev.: 54441

fix typo in makefile that caused Wasatch gpu build failure

0 lines of code changed in 2 files:

tsaad 2015-12-01 15:14 Rev.: 54440

New abstraction for momentum transport in preparation for compressible flow support.
1. Create a base class for momentum transport
2. Derive a class for low-Mach problems

TODO: adapt the compressible momentum equation to use this new abstraction

1611 lines of code changed in 8 files:

jthornoc 2015-12-01 11:09 Rev.: 54435

For Dav: Have configure look in /usr/local/lib for fortran if all else fails. This hack needed for a new Mac running El Capitan.

477 lines of code changed in 2 files:

November 2015 »

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