Designed especially for neurobiologists, FluoRender is an interactive tool for multi-channel fluorescence microscopy data visualization and analysis.
Deep brain stimulation
BrainStimulator is a set of networks that are used in SCIRun to perform simulations of brain stimulation such as transcranial direct current stimulation (tDCS) and magnetic transcranial stimulation (TMS).
Developing software tools for science has always been a central vision of the SCI Institute.

General News

martin-ascac newsMartin Berzins has been appointed a member of the Advanced Scientific Computing Advisory Committee (ASCAC). The committee provides advice and recommendations on scientific, technical, and programmatic issues relating to the ASCAC Program.

The Advanced Scientific Computing Advisory Committee (ASCAC), established on August 12, 1999, provides valuable, independent advice to the Department of Energy on a variety of complex scientific and technical issues related to its Advanced Scientific Computing Research program.

Learn more about ASCAC
Simulations Aimed at Safer Transport of ExplosivesCredit: Jim Collins - Argonne Leadership Computing Facility
See original article: "Simulations Aimed at Safer Transport of Explosives"

In 2005, a semi-truck hauling 35,000 pounds of explosives through the Spanish Fork Canyon in Utah crashed and caught fire, causing a dramatic explosion that left a 30-by-70-foot crater in the highway.

Fortunately, there were no fatalities. With about three minutes between the crash and the explosion, the driver and other motorists had time to flee. Some injuries did occur, however, as the explosion sent debris flying in all directions and produced a shock wave that blew out nearby car windows.

udcc-openhouse newsWednesday, September 17th 2014
10 am to 3 pm
University of Utah
Warnock Engineering Building, Catmull Gallary
72 So. Central Campus Dr.

The first UDCC open house will bring together our consortium partners and engineering students to a single venue. Partners interested in sponsoring student internships through the new Data Center Engineering Certificate will be present for questions, and students will have the opportunity to hear from and engage with some of our nation's leading experts in the field. You can visit our website or email us for more information.

data-miningFrom the University of Utah: Feb. 7, 2014 – The University of Utah's College of Engineering received approval this week for its new graduate certificate program in big data.

This emerging field – which addresses large sets of data too complex, diverse or rapidly changing for one computer to handle – affects everything from studying traffic patterns to managing sensitive information online. Big data is also big business – for example, using big data to improve efficiency and quality in the health care sector is estimated to be worth more than $300 billion each year.

"We're seeing a revolution in the availability of data. It's easy to collect information, but processing and analyzing large stores of data is becoming increasingly difficult. We are at the point where the traditional analytical tools for attacking this problem are breaking down," says Jeff Phillips, assistant professor of computer science and coordinator of the new program.

blood-vessel-growth Jan2014 newsJan. 22, 2014 – University of Utah bioengineers showed that tiny blood vessels grow better in the laboratory if the tissue surrounding them is less dense. Then the researchers created a computer simulation to predict such growth accurately – an early step toward treatments to provide blood supply to tissues damaged by diabetes and heart attacks and to skin grafts and implanted ligaments and tendons.

utahdata-certificate newsPress Release from The Utah Daily Chronicle
By Nathan Turner on October 7, 2013.
Contact Nathan Turner at This email address is being protected from spambots. You need JavaScript enabled to view it..

The October session of the Academic Senate approved a proposed cross-disciplinary certificate to the College of Engineering and Scientific Computing and Imaging Institute on Monday evening.

FreshTracks-9-13 newsWelcome to the Fresh Tracks Newsletter, highlighting news from the SCI Institute. Since our first newsletter six months ago, SCI Institute faculty, staff, and students have continued to perform exciting research, lead international conferences, perform important professional service, and educate students at the graduate, undergraduate, and even high school levels.

udcc-openhouse newsWednesday, September 11th
11 am to 2 pm
University of Utah
Warnock Engineering Building, Catmull Gallary
72 So. Central Campus Dr.

The first UDCC open house will bring together our consortium partners and engineering students to a single venue. Partners interested in sponsoring student internships through the new Data Center Engineering Certificate will be present for questions, and students will have the opportunity to hear from and engage with some of our nation's leading experts in the field. You can visit our website or email us for more information.

NNSA-COEs newsPress Release from the National Nuclear Security Administration Website, June 27, 2013.

WASHINGTON, D.C. – The National Nuclear Security Administration (NNSA) today announced the selection of its six new centers of excellence whose primary focus will be on the emerging field of predictive science.

Six universities were selected either as a Multidisciplinary Simulation Center (MSC) or as a Single-Discipline Center (SDC). The MSCs will receive $3.2 million and the SDCs will receive $1.6 million each year for five years under NNSA's Predictive Science Academic Alliance Program II (PSAAP II) agreement.

See original article on Explore Utah Science website: "When Art and Science Intertwine"
Written by  Julie Kiefer

ExpUtahScience newsThe collection of images appears to be a study in shape, color, and design. Zig-zagging lines that meld into smoke-like ribbons; an explosion of colors that seemingly blasts beyond the frame; a brain washed in pastels (see Image Gallery below). What at first glance looks like art is actually much more. Each piece is a window into scientific discovery.

crj-FiRe2013 newsDr. Johnson will be a featured speaker at the 2013 Future in Review (FiRe 2013) conference. He will be among a number of other distinguished guests including the Secretary of the Department of Homeland Security, Mdme. Janet Napolitano. The conference will be held May 21 - 24 in Laguna Beach, California. This year's conference is unified under the theme "Digitizing the Planet." For more details visit the Future in Review website.