Designed especially for neurobiologists, FluoRender is an interactive tool for multi-channel fluorescence microscopy data visualization and analysis.
Deep brain stimulation
BrainStimulator is a set of networks that are used in SCIRun to perform simulations of brain stimulation such as transcranial direct current stimulation (tDCS) and magnetic transcranial stimulation (TMS).
Developing software tools for science has always been a central vision of the SCI Institute.

General News

data-miningFrom the University of Utah: Feb. 7, 2014 – The University of Utah's College of Engineering received approval this week for its new graduate certificate program in big data.

This emerging field – which addresses large sets of data too complex, diverse or rapidly changing for one computer to handle – affects everything from studying traffic patterns to managing sensitive information online. Big data is also big business – for example, using big data to improve efficiency and quality in the health care sector is estimated to be worth more than $300 billion each year.

"We're seeing a revolution in the availability of data. It's easy to collect information, but processing and analyzing large stores of data is becoming increasingly difficult. We are at the point where the traditional analytical tools for attacking this problem are breaking down," says Jeff Phillips, assistant professor of computer science and coordinator of the new program.

blood-vessel-growth Jan2014 newsJan. 22, 2014 – University of Utah bioengineers showed that tiny blood vessels grow better in the laboratory if the tissue surrounding them is less dense. Then the researchers created a computer simulation to predict such growth accurately – an early step toward treatments to provide blood supply to tissues damaged by diabetes and heart attacks and to skin grafts and implanted ligaments and tendons.

utahdata-certificate newsPress Release from The Utah Daily Chronicle
By Nathan Turner on October 7, 2013.
Contact Nathan Turner at This email address is being protected from spambots. You need JavaScript enabled to view it..

The October session of the Academic Senate approved a proposed cross-disciplinary certificate to the College of Engineering and Scientific Computing and Imaging Institute on Monday evening.

FreshTracks-9-13 newsWelcome to the Fresh Tracks Newsletter, highlighting news from the SCI Institute. Since our first newsletter six months ago, SCI Institute faculty, staff, and students have continued to perform exciting research, lead international conferences, perform important professional service, and educate students at the graduate, undergraduate, and even high school levels.

udcc-openhouse newsWednesday, September 11th
11 am to 2 pm
University of Utah
Warnock Engineering Building, Catmull Gallary
72 So. Central Campus Dr.

The first UDCC open house will bring together our consortium partners and engineering students to a single venue. Partners interested in sponsoring student internships through the new Data Center Engineering Certificate will be present for questions, and students will have the opportunity to hear from and engage with some of our nation's leading experts in the field. You can visit our website or email us for more information.

NNSA-COEs newsPress Release from the National Nuclear Security Administration Website, June 27, 2013.

WASHINGTON, D.C. – The National Nuclear Security Administration (NNSA) today announced the selection of its six new centers of excellence whose primary focus will be on the emerging field of predictive science.

Six universities were selected either as a Multidisciplinary Simulation Center (MSC) or as a Single-Discipline Center (SDC). The MSCs will receive $3.2 million and the SDCs will receive $1.6 million each year for five years under NNSA's Predictive Science Academic Alliance Program II (PSAAP II) agreement.

See original article on Explore Utah Science website: "When Art and Science Intertwine"
Written by  Julie Kiefer

ExpUtahScience newsThe collection of images appears to be a study in shape, color, and design. Zig-zagging lines that meld into smoke-like ribbons; an explosion of colors that seemingly blasts beyond the frame; a brain washed in pastels (see Image Gallery below). What at first glance looks like art is actually much more. Each piece is a window into scientific discovery.

crj-FiRe2013 newsDr. Johnson will be a featured speaker at the 2013 Future in Review (FiRe 2013) conference. He will be among a number of other distinguished guests including the Secretary of the Department of Homeland Security, Mdme. Janet Napolitano. The conference will be held May 21 - 24 in Laguna Beach, California. This year's conference is unified under the theme "Digitizing the Planet." For more details visit the Future in Review website.
fresh-tracksWelcome to the first Fresh Tracks Newsletter, highlighting news from the SCI Institute. 2012 was another exciting year, culminating in our second successful SCIx Open House. Hundreds of people took advantage of the event to learn more about SCI Institute research and hear SCIx keynote speaker Alan Kay, a Turing Award recipient give an enlightening and entertaining presentation. SCI Institute faculty garnered a number of prestigious research awards in 2012. Jeff Weiss received the Van Mow Medal, Miriah Meyer was named a Microsoft Faculty Fellow and a TED Fellow, Chuck Hansen was elected as an IEEE Fellow, and Valerio Pascucci was inducted as a DOE Fellow. Tolga Tasdizen received an NSF CAREER Award and the College of Engineering Distinguished Teaching Award. I was honored to receive the 2012 IEEE IPDPS Charles Babbage Award.

dongbinDongbin Xiu has joined the University of Utah's Scientific Computing and Imaging (SCI) Institute as a Professor of Mathematics. The SCI Institute focuses on solving important problems in biomedicine, science, and engineering using computation and is an international research leader in the areas of scientific computing, visualization, and image analysis.

cmbbe-1311th INTERNATIONAL SYMPOSIUM ON COMPUTER METHODS IN BIOMECHANICS AND BIOMEDICAL ENGINEERING http://cmbbe13.sci.utah.edu

April 3-7, 2013 Salt Lake City, Utah, USA

Chair:  Jeffrey Weiss, University of Utah

Co-Chair:  Gerard Ateshian, Columbia University