StatSVN - Directory StandAlone/

[root]/StandAlone

Benchmarks (2 files, 251 lines)

tools (2 files, 824 lines)

compare_mms (11 files, 1398 lines)

dumpfields (29 files, 5665 lines)

extractors (9 files, 4259 lines)

fsspeed (1 files, 48 lines)

graphview (8 files, 1701 lines)

makedot (2 files, 253 lines)

mpi_test (3 files, 893 lines)

pfs (5 files, 1766 lines)

puda (33 files, 5117 lines)

radiusMaker (2 files, 331 lines)

tracker (2 files, 114 lines)

uda2nrrd (18 files, 3250 lines)

uda2vis (3 files, 763 lines)

water (0 files, 0 lines)

Author	Changes	Lines of Code	Lines per Change
Totals	51 (100.0%)	956 (100.0%)	18.7
harman	7 (13.7%)	459 (48.0%)	65.5
jas	28 (54.9%)	295 (30.9%)	10.5
dav	4 (7.8%)	125 (13.1%)	31.2
ahumphrey	6 (11.8%)	69 (7.2%)	11.5
qymeng	3 (5.9%)	5 (0.5%)	1.6
tsaad	1 (2.0%)	2 (0.2%)	2.0
guilkey	2 (3.9%)	1 (0.1%)	0.5

Most Recent Commits

jas 2012-12-28 20:17 Rev.: 49772

Add RadProps library to the static build for sus.

0 lines of code changed in 2 files:

StandAlone: sub.mk (new)

qymeng 2012-11-27 11:28 Rev.: 49613

support Stencil7 in compare_uda

0 lines of code changed in 2 files:

StandAlone: compare_uda.cc (-4)

harman 2012-11-21 17:44 Rev.: 49596

Added support for Stencil7 variables. This is incomplete.
Additional support is needed in TypeDescription.

19 lines of code changed in 1 file:

StandAlone: compare_uda.cc (+19)

tsaad 2012-11-13 21:48 Rev.: 49555

fix minor bug in compare using when using -exact option. This was setting the rel_tolerance to 0 and then then taking its log and passing that to cout precision which caused cout to set its precision to default (6). Now it defaults to 16 when the exact option is used.

2 lines of code changed in 1 file:

StandAlone: compare_uda.cc (+2 -1)

jas 2012-10-22 23:47 Rev.: 49484

Update the copyright notice to include the MIT License and fix the formatting
issues with the spurious "\".

45 lines of code changed in 16 files:

StandAlone: compare_uda.cc (+5 -3), gambitFileReader.cc (+5 -3), partvarRange.cc (new), restart_merger.cc (+5 -3), selectpart.cc (new), slb.cc (new), sub.mk (+5 -3), sub.mk.release (new), sus.cc (new)

harman 2012-10-17 09:42 Rev.: 49456

advect_3L_3D.ups:
reduced size of computational domain and number of timesteps.
reduced size of sphere.

compare_uda:
- increased number of significant digits output when there's a failure.

1 lines of code changed in 1 file:

StandAlone: compare_uda.cc (+1 -1)

jas 2012-10-12 16:59 Rev.: 49413

Squashed commit of the following:

commit a1e8c675d139003247378067ec0431806029cb14
Merge: 5e29398 49ca967
Author: jas <jas@aee3fe44-4ef4-0310-ac56-cc817e9d0e43>
Date: Fri Oct 12 23:36:18 2012 +0000

Update branch with latest changes from trunk.

git-svn-id: https://gforge.sci.utah.edu/svn/uintah/branches/UintahRelease_1_5_0@49412 aee3fe44-4ef4-0310-ac56-cc817e9d0e43

commit 5e293985e95fc70fd682fbf31fb93d7b72f1108e
Author: jas <jas@aee3fe44-4ef4-0310-ac56-cc817e9d0e43>
Date: Fri Oct 12 23:36:07 2012 +0000

Fix missing slash in installation guide.

Refactor the boost discovery mechanism in configure.ac.

git-svn-id: https://gforge.sci.utah.edu/svn/uintah/branches/UintahRelease_1_5_0@49411 aee3fe44-4ef4-0310-ac56-cc817e9d0e43

commit dd2caee9921c7d89791d866bccc1adbddf967f04
Author: jas <jas@aee3fe44-4ef4-0310-ac56-cc817e9d0e43>
Date: Fri Oct 12 23:35:56 2012 +0000

Update build instructions for petsc and hypre for Fedora and CentOS.

Add BASE_LIB_DIR to the Boost section in configure.ac.

git-svn-id: https://gforge.sci.utah.edu/svn/uintah/branches/UintahRelease_1_5_0@49410 aee3fe44-4ef4-0310-ac56-cc817e9d0e43

commit c211e5394202174e69c4781b1bfd937e6a4e9e70
Merge: 425f4ca 6255204
Author: jas <jas@aee3fe44-4ef4-0310-ac56-cc817e9d0e43>
Date: Fri Oct 12 23:35:14 2012 +0000

Update the release branch with changes from master.

git-svn-id: https://gforge.sci.utah.edu/svn/uintah/branches/UintahRelease_1_5_0@49409 aee3fe44-4ef4-0310-ac56-cc817e9d0e43

commit 425f4caed59a4864374dbed64d46ade4d5fa5eee
Author: jas <jas@aee3fe44-4ef4-0310-ac56-cc817e9d0e43>
Date: Fri Oct 12 23:33:39 2012 +0000

Remove all remaining pieces of the Angio component.

git-svn-id: https://gforge.sci.utah.edu/svn/uintah/branches/UintahRelease_1_5_0@49408 aee3fe44-4ef4-0310-ac56-cc817e9d0e43

commit 5a92abece778059b6a1765ebd971b71744f64793
Author: jas <jas@aee3fe44-4ef4-0310-ac56-cc817e9d0e43>
Date: Fri Oct 12 23:33:24 2012 +0000

Remove the Angio component.

git-svn-id: https://gforge.sci.utah.edu/svn/uintah/branches/UintahRelease_1_5_0@49407 aee3fe44-4ef4-0310-ac56-cc817e9d0e43

commit 78e24afb3a187a45cf3669ff4588d096c8d38b8f
Author: jas <jas@aee3fe44-4ef4-0310-ac56-cc817e9d0e43>
Date: Fri Oct 12 23:33:11 2012 +0000

Remove the Dan_files/ from the StandAlone/inputs/UintahRelease/.

git-svn-id: https://gforge.sci.utah.edu/svn/uintah/branches/UintahRelease_1_5_0@49406 aee3fe44-4ef4-0310-ac56-cc817e9d0e43

commit a938560edb0607e2e4aa63cb742b4b55b7f62cd7
Author: jas <jas@aee3fe44-4ef4-0310-ac56-cc817e9d0e43>
Date: Fri Oct 12 23:33:01 2012 +0000

Notes about compiling boost and cmake and changes to the Centos section.

git-svn-id: https://gforge.sci.utah.edu/svn/uintah/branches/UintahRelease_1_5_0@49405 aee3fe44-4ef4-0310-ac56-cc817e9d0e43

commit 0c7aa437777c336f92dd8be971c1e1a1cf01c367
Author: jas <jas@aee3fe44-4ef4-0310-ac56-cc817e9d0e43>
Date: Fri Oct 12 23:32:53 2012 +0000

Add wasatch build dependences for opensuse.

git-svn-id: https://gforge.sci.utah.edu/svn/uintah/branches/UintahRelease_1_5_0@49404 aee3fe44-4ef4-0310-ac56-cc817e9d0e43

commit 23b71be7d9ffd177b81f64498411584c055504e1
Author: jas <jas@aee3fe44-4ef4-0310-ac56-cc817e9d0e43>
Date: Fri Oct 12 23:32:46 2012 +0000

Update dependencies for CentOS for building Wasatch.

git-svn-id: https://gforge.sci.utah.edu/svn/uintah/branches/UintahRelease_1_5_0@49403 aee3fe44-4ef4-0310-ac56-cc817e9d0e43

commit 5b99e25a6306b02cc8ecb9baad84fa3d470e194f
Author: jas <jas@aee3fe44-4ef4-0310-ac56-cc817e9d0e43>
Date: Fri Oct 12 23:32:38 2012 +0000

Update packages necessary for compiling Wasatch.

git-svn-id: https://gforge.sci.utah.edu/svn/uintah/branches/UintahRelease_1_5_0@49402 aee3fe44-4ef4-0310-ac56-cc817e9d0e43

commit add8b7cbd6668abbe4f57f584dab24c8552b6da8
Author: tsaad <tsaad@aee3fe44-4ef4-0310-ac56-cc817e9d0e43>
Date: Tue Oct 2 20:36:32 2012 +0000

remove obsolete input files.

git-svn-id: https://gforge.sci.utah.edu/svn/uintah/branches/UintahRelease_1_5_0@49330 aee3fe44-4ef4-0310-ac56-cc817e9d0e43

commit f7ac87d4fd61d896eb1ba9f52a0b6cd2970783e5
Author: jas <jas@aee3fe44-4ef4-0310-ac56-cc817e9d0e43>
Date: Sun Sep 30 02:11:34 2012 +0000

Use the 1.5.0 git branch for the various Wasatch3P libraries.

git-svn-id: https://gforge.sci.utah.edu/svn/uintah/branches/UintahRelease_1_5_0@49311 aee3fe44-4ef4-0310-ac56-cc817e9d0e43

commit 25156c6ba612634f5d66a5fb1be670fd5a82a23b
Author: jas <jas@aee3fe44-4ef4-0310-ac56-cc817e9d0e43>
Date: Sat Sep 29 03:41:39 2012 +0000

Remove the release file in the build_scripts/.

git-svn-id: https://gforge.sci.utah.edu/svn/uintah/branches/UintahRelease_1_5_0@49308 aee3fe44-4ef4-0310-ac56-cc817e9d0e43

commit 94b484f3b209b8b5d8ee73bae0f9ba54c91592ef
Author: jas <jas@aee3fe44-4ef4-0310-ac56-cc817e9d0e43>
Date: Sat Sep 29 03:41:31 2012 +0000

Change == to = in all "test statements".

git-svn-id: https://gforge.sci.utah.edu/svn/uintah/branches/UintahRelease_1_5_0@49307 aee3fe44-4ef4-0310-ac56-cc817e9d0e43

commit daeab4316362d0081fb8a66832734a3ffdfbff1f
Author: jas <jas@aee3fe44-4ef4-0310-ac56-cc817e9d0e43>
Date: Sat Sep 29 03:41:23 2012 +0000

Update to version 1.5.

git-svn-id: https://gforge.sci.utah.edu/svn/uintah/branches/UintahRelease_1_5_0@49306 aee3fe44-4ef4-0310-ac56-cc817e9d0e43

commit e3d51281308a5fbbde3f097e5826e85686fe9254
Author: jas <jas@aee3fe44-4ef4-0310-ac56-cc817e9d0e43>
Date: Sat Sep 29 03:41:15 2012 +0000

Update release files to include Wasatch component.

Add option to build Wasatch3P libraries for a particular hash tag.

git-svn-id: https://gforge.sci.utah.edu/svn/uintah/branches/UintahRelease_1_5_0@49305 aee3fe44-4ef4-0310-ac56-cc817e9d0e43

commit 9a8451d8a5b1fbf36626b3727dad48d7184b5e6d
Merge: 984d356 0a25aa2
Author: jas <jas@aee3fe44-4ef4-0310-ac56-cc817e9d0e43>
Date: Sat Sep 29 03:38:16 2012 +0000

Update copyright notice.

git-svn-id: https://gforge.sci.utah.edu/svn/uintah/branches/UintahRelease_1_5_0@49304 aee3fe44-4ef4-0310-ac56-cc817e9d0e43

commit 984d3566f78e7e1c2b2c29ea0368451ae768119a
Author: jas <jas@aee3fe44-4ef4-0310-ac56-cc817e9d0e43>
Date: Fri Sep 28 18:39:29 2012 +0000

Uintah 1.5.0 Branch.

git-svn-id: https://gforge.sci.utah.edu/svn/uintah/branches/UintahRelease_1_5_0@49299 aee3fe44-4ef4-0310-ac56-cc817e9d0e43

commit 0a25aa2731b9c75fcf609f70093484af5be5f23a
Author: John Schmidt <john.schmidt@utah.edu>
Date: Thu Sep 27 01:50:47 2012 -0600

Updated copyright header.

247 lines of code changed in 9 files:

StandAlone: compare_uda.cc (+20 -29), gambitFileReader.cc (+20 -28), partvarRange.cc (+20 -28), restart_merger.cc (+20 -29), selectpart.cc (+20 -28), slb.cc (+20 -28), sub.mk (+18 -23), sub.mk.release (+89 -61), sus.cc (+20 -29)

guilkey 2012-10-02 16:38 Rev.: 49335

Removing the Angio component from Uintah.

1 lines of code changed in 2 files:

StandAlone: sub.mk (-1), sus.cc (+1 -1)

dav 2012-10-01 15:40 Rev.: 49326

The Uintah Homebrew development team decided to remove the built in
(Unix file) permissions setting code in favor that the code would use
a users default permissions when it creates new UDA directories.
(This also means that the automatic setting of unix group has been
removed.)

A user is not in charge of their own permissions. If they would like
UDAs to be created such that other members of a specific group can
automatically see/read those files, then the user should do these things:

Set their umask to 022, and make sure the group set id bit is set for
the parent directory. You may want to set the umask in your dot login
script. Here is an example of the commands you might want to run:

umask 022
chmod g+s <data directory>

This gives: drwxr-sr-x

If, however, you want the data to be private, you might want to do the
following:

umask 077

This gives: drwx------

M CCA/Components/DataArchiver/DataArchiver.cc
M StandAlone/sus.cc

Removed the umask permission and group changing lines.

0 lines of code changed in 1 file:

StandAlone: sus.cc (-2)

ahumphrey 2012-09-21 14:42 Rev.: 49256

Allow all schedulers to override the default via SCI_DEBUG env var or via XML in input files.
Also document these new debug vars in environmentalFLags.txt.
Fix two spots where only 1 thread was disallowed when using Unified Scheduler.

1 lines of code changed in 1 file:

StandAlone: sus.cc (+1 -1)

dav 2012-09-04 15:17 Rev.: 49168

Update compare_uda (and the Regression Tester's use of it) to be able
to print out the first error for each variable (instead of just dieing
after the very first difference is found).

Use the new '-concise' flag in addition to the already existing
'-as_warnings' flag in the RT.

M StandAlone/compare_uda.cc

* Cleaned up some formatting. (Truly, white space is your friend.
and single letter variable names are NOT (especially if they
are used for more then a few lines in a for loop).)
* Added the -concise flag. (Note, even though the diff will have a bunch
of lines, the only 'real' additions are about 10 lines dealing with the
'-concise' flag.)

M R_Tester/helpers/compare_sus_runs_by_udas

* Add the -as_warnings and -concise flags to the compare_uda runs.

111 lines of code changed in 1 file:

StandAlone: compare_uda.cc (+111 -90)

ahumphrey 2012-08-30 16:55 Rev.: 49156

Disengage Hypre includes in a few more spots.

4 lines of code changed in 1 file:

StandAlone: sus.cc (+4)

dav 2012-08-20 16:44 Rev.: 49100

Fix DigitalFilterGenerator build on Mac

3 lines of code changed in 1 file:

StandAlone: sub.mk (+3)

dav 2012-08-20 16:12 Rev.: 49099

Fix a couple of build problems (that occurs on various platforms but are exemplified in static builds.)

M StandAlone/sub.mk

Build the DigitalFilterGenerator (from CCA/Components/Arches) here as
I have direct access to the correct list of LIBS (both for static and
shared builds).

M CCA/Components/Arches/sub.mk

Don't specify the DigitalFilterGenerator build line here... it has been
moved to StandAlone/sub.mk (see above).

M StandAlone/tools/extractors/sub.mk

Fix the static build of this utility (need to actually link in the
tiff library)... Not sure why the RT (don't we have a static build
RT?) didn't catch this...

11 lines of code changed in 1 file:

StandAlone: sub.mk (+11)

harman 2012-08-08 10:12 Rev.: 49044

more formating
name changes
begin_ -> d_begin
pField2 -> field2 <consistent with field>

57 lines of code changed in 1 file:

StandAlone: compare_uda.cc (+57 -50)

harman 2012-08-08 09:36 Rev.: 49043

variable name changes
var_ -> d_var

47 lines of code changed in 1 file:

StandAlone: compare_uda.cc (+47 -46)

harman 2012-08-08 09:00 Rev.: 49042

Added d_ to the global variables names.

65 lines of code changed in 1 file:

StandAlone: compare_uda.cc (+65 -61)

harman 2012-08-08 08:43 Rev.: 49041

formatting:
- added vertical & horziontal spaces
- aligment
- 2 space indentation
- no longer using archaic 80 column wrap rule. Monitors are bigger these days.

268 lines of code changed in 1 file:

StandAlone: compare_uda.cc (+268 -172)

harman 2012-05-04 15:15 Rev.: 48719

Added a new post processing utility that takes an uda
averages the particle data in each cell to the cell-center and
dumps out a stack of tiff files. Still thrashing around.....

Usage: tools/extractors/particle2tiff [options] -uda <archive file>

Valid options are:
-h, --help
-v, --variable: <variable name>
-m, --material: <material number> [defaults to 0]

-tlow, --timesteplow: [int] (sets start output timestep to int) [defaults to 0]
-thigh, --timestephigh: [int] (sets end output timestep to int) [defaults to last timestep]
-timestep, --timestep: [int] (only outputs from timestep int) [defaults to 0]

-istart, --indexs: <i> <j> <k> [ints] starting point cell index [defaults to 0 0 0]
-iend, --indexe: <i> <j> <k> [ints] end-point cell index [defaults to 0 0 0]
-startPt <x> <y> <z> [doubles] starting point of line in physical coordinates
-endPt <x> <y> <z> [doubles] end-point of line in physical coordinates

-l, --level: [int] (level index to query range from) [defaults to 0]
-d, --dir: directory name where all output is kept [none]
--cellIndexFile: <filename> (file that contains a list of cell indices)
[int 100, 43, 0]
[int 101, 43, 0]
[int 102, 44, 0]
----------------------------------------------------------------------------------------

2 lines of code changed in 1 file:

StandAlone: sub.mk (+2)

jas 2012-04-23 07:46 Rev.: 48662

Remove UINTAHSHARE and uintahshare.h include files.

3 lines of code changed in 1 file:

StandAlone: sus.cc (+3 -9)

qymeng 2012-03-25 12:43 Rev.: 48440

Support up to 64 threads per MPI rank.

5 lines of code changed in 1 file:

StandAlone: sus.cc (+5 -3)

ahumphrey 2012-03-20 14:33 Rev.: 48413

- Add build system support for Google Perftools (CPU and heap profiler)
- Add file: include/sci_defs/gperftools_testdefs.h.in
- Update configure script

2 lines of code changed in 1 file:

StandAlone: sub.mk (+2 -1)

ahumphrey 2012-02-22 19:59 Rev.: 48291

Reintegration of /branches/gpu_dev with trunk.
r47314-r48286

62 lines of code changed in 3 files:

StandAlone: sub.mk (+1 -1), sub.mk.release (+1 -1), sus.cc (+60 -47)

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