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Designed especially for neurobiologists, FluoRender is an interactive tool for multi-channel fluorescence microscopy data visualization and analysis.
Deep brain stimulation
BrainStimulator is a set of networks that are used in SCIRun to perform simulations of brain stimulation such as transcranial direct current stimulation (tDCS) and magnetic transcranial stimulation (TMS).
Developing software tools for science has always been a central vision of the SCI Institute.

Events on March 4, 2019

Kris Campbell, PhD Student Presents:

Surface-Based Spatial Pyramid Matching of Cortical Regions for Analysis of Cognitive Performance

March 4, 2019 at 12:00pm for 1hr
Meldrum Conference Room, WEB 2760
Warnock Engineering Building, 2nd floor.

Abstract:

We propose a method to analyze the relationship between the shape of cortical regions and cognitive measures such as reading ability and vocabulary knowledge. Functional regions on cortical surfaces can vary not only in size and shape but also in topology and position relative to neighboring regions. Standard diffeomorphism-based shape analysis tools do not work well here because diffeomorphisms are unable to capture these topological differences which include region splitting and merging across subjects. To address this, we propose Icosahedral Spatial Pyramid Matching of region borders computed on the surface of a sphere to capture this variation in regional topology, position, and shape. We then analyze how this variation corresponds to measures of language performance. Analysis is performed using a subset of 27 retest subjects from the Human Connectome Project in order to understand the reproducibility and potential of this method.

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