Dr. Jim Clark

Founder of Netscape, SGI, WEBMD/Healtheon, and cofounder and CEO of CommandScape, Inc

Watch the Keynote

Scientific Visualization

• Platform-Independent Genome-Wide Pattern of DNA Copy-Number Alterations Predicting Astrocytoma Survival and Response to Treatment Revealed by the GSVD Formulated as a Comparative Spectral Decomposition: Katherine A. Aiello and Orly Alter
• A Novel Tensor GSVD Predicting Ovarian Serous Cystadenocarcinoma Survival and Response to Platinum-Based Chemotherapy: Theodore E. Schomay, Katherine A. Aiello, and Orly Alter
• SVD Identifies Transcript Length Distribution Functions from DNA Microarray Data and Reveals Evolutionary Forces Globally Affecting GBM Metabolism: Nicolas M. Bertagnolli, Justin A. Drake, Jason M. Tennessen and Orly Alter
• Detecting copy-number variation using dNTP limited PCR and high-resolution melting: Luming Zhou, Robert Palais and Carl T. Wittwer
• In Situ Visualization of Particle Simulations: Will Usher, Ingo Wald, Aaron Knoll, Michael Papka, Valerio Pascucci
• Grassmannian Atlas: A General Framework for Exploring Linear Projections of High-Dimensional Data: Shusen Liu, Peer-Timo Bremer, Jayaraman J. Thiagarajan, Bei Wang, Brian Summa, and Valerio Pascucci
• PIDX: Scalable I/O for Massive Simulations: Sidharth Kumar, Steve Petruzza, Duong Hoang, Valerio Pascucci
• Brain Source Localization Pipeline: Ally Warner, Chris Johnson, Moritz Dannhauer
• OpenSpace: Charles Hansen, Gene Payne, Matthew Territo
• Parallel processing of non-human primate brain data: Steve Petruzza, Aniketh Venkat, Attila Gyulassy, Frederick Federer, Alessandra Angelucci, Peer-Timo Bremer and Valerio Pascucci
• Data Exploration for Nuclear Safety Analysis: Dan Maljovec, BeiWang, Paul Rosen, Diego Mandelli, Andrea Alfonsi, Giovanni Pastore, Cristian Rabiti, Valerio Pascucci
• Interactive Analysis of Petascale Climate Datasets: Cameron Christensen, Shusen Liu, Peer-Timo Bremer, Valerio Pascucci
• Direct Multifield Volume Ray Casting of Fiber Surfaces: Kui Wu, Aaron Knoll, Benjamin J Isaac, Hamish Carr, Valerio Pascucci
• Interactive Visualization and Exploration of Tracking Graphs for Understanding Evolution of Features: Wathsala Widanagamaachchi, Peer-Timo Bremer, Valerio Pascucci
• Interactive Topological Exploration of Particle Ensembles: Harsh Bhatia, Pavol Klacansky, Shusen Liu, Wathsala Widanagamaachchi, Attila Gyulassy, Valerio Pascucci, Peer-Timo Bremer
• ViSOAR Ag Explorer: Amy A. Gooch, Giorgio Scorzelli, Attila Gyulassy, Peer-Timo Bremer, Valerio Pascucci
• Telemedicine: ViSOAR Share: Luis Carlos Antola, Amy A. Gooch, Giorgio Scorzelli, Attila Gyulassy, Valerio Pascucci
• Data Acquisition, Management and Computation for Neuroscience: Aniketh Venkat, Frederick Federer, Steve Petruzza, Attila Gyulassy, Alessandra Angelucci and Valerio Pascucci
• Robust Feature Simplification of Vector Fields: Bei Wang, Primoz Skraba, Paul Rosen, Guoning Chen, Harsh Bhatia and Valerio Pascucci 
• Analysis and Visualization of ALMA Data Cubes: Paul Rosen, Bei Wang, Chris Johnson, Jeff Kern, Betsy Mills, Anil Seth
• Finding Hidden Shapes: Topology for Feature-Based Reasoning: Attila Gyulassy, Harsh Bhatia, Aaron Knoll, Bei Wang, Peer-Timo Bremer, Valerio Pascucci

Demos:

• FluoRender: Yong Wan
• Neuron Microscopy Data Tracing in Virtual Reality: Pavol Klacansky and Will Usher
• Intel’s OSPRay Renderer on a Displaywall: Laura Lediaev
• OpenSpace: Gene Payne, Matthew Territo

Infovis

• Visually Comparing Weather Features in Forecasts: P. Samuel Quinan and Miriah Meyer
• Visualization for Reverse Engineering the Retina: Ethan Kerzner and Miriah Meyer
• Pathfinder: Visual Analysis of Paths in Heterogeneous Graphs: Christian Partl, Samuel Gratzl, Marc Streit, Anne Mai Wasserman, Hanspeter Pfister, Dieter Schmalstieg, and Alexander Lex
• BubbleNet: A Cyber Security Dashboard: Sean McKenna, Diane Staheli, Cody Fulcher, Miriah Meyer
• Distributed Indoor Air-quality Sensing (DIAS): Jimmy Moore, Miriah Meyer
• DragonView: Toward Understanding Network Interference in Dragonfly-based Supercomputers: Yarden Livnat, Abhinav Bhatele, Nikhil Jain, Peer-Timo Bremer, Valerio Pascucci

Imaging

• Biomedical Image and Data Analysis Core – BIDAC: Josh Cates, Clement Vachet
• Connectomics Empowered By Deep Learning: Mehran Javanmardi, Mehdi Sajjadi, Tolga Tasdizen
• Magnetic Resonance Imaging Uses: Eleanor Wong and Blake Zimmerman
• MRI and CT Basis for SCI Imaging Projects: Markus Foote and Blake Zimmerman
• Motion Estimation in Medical Images: Markus Foote, Caleb Rottman, Sarang Joshi
• Generalized Data Depth and Applications: Mukund Raj, Mahsa Mirzargar, Robert M. Kirby and Ross T. Whitaker
• Quantitative Analysis of Femoral Cortical Bone Thickness using Shape Analysis: Praful Agrawal, Shireen Y. Elhabian, Penny Atkins, Ross T. Whitaker, Jeff Weiss, and Andrew E. Anderson
• Objective Severity Metric for Craniosynostosis: Riddhish Bhalodia, Ladislav Kavan, Ross Whitaker

Demos:

• ShapeWorks: Praful Agrawal
• Shape Variation Animation: Rhiddish Bhalodia

Biomedical Computing

• Virtual Neurophysiology Workbench: Alberto Fuentes, Christopher R. Butson PhD
• Patient-Specific Computational Modeling Aids Deep Brain Stimulation Therapies: Andrew Janson, Johannes Vorwerk PhD, Christopher R. Butson PhD
• Mobile Decision Support System for Nurse Management of Neuromodulation Therapy: Gordon Duffley, Jens Krueger PhD,AnikoSzabo PhD, Barbara Lutz PhD, Daniel Martinez-Ramirez MD, Michael S. OkunMD, Christopher R. ButsonPhD
• Which anatomical regions are activated by Deep Brain Stimulation as elucidated by high field diffusion weighted MRI?: Katherine G. Warthen, Dr. Chris R. Buston, Dr. Justin D. Hilliard, Dr. Kelly D. Foote
• FEBio: Finite Elements for Biomechanics: Steve A. Maas, David S. Rawlins, Gerard Ateshian, Benjamin J. Ellis, Jeffrey A. Weiss
• Effect of Focal Chondral Defects in the Hip: A Framework for Understanding Degradation and Developing Treatment Strategies: Jocelyn N. Todd, Travis G. Maak, Jeffrey A. Weiss
• Data Tools for ECGI: ECG Forward/Inverse Toolkit and EDGAR Database: Computational Electrocardiology Group
• Noninvasive Electrical Diagnosis of Cardiac Abnormalities: The Computational Electrocardiology Group
• The International Neuromodulation Registry: Butson Lab: Kara Johnson, Gordon Duffley, Andrew Janson, Daria Anderson, Katie Warthen, Shana Black, Corinne Garcia, Theresa Lins, Johannes Vorwerk, PhD, Andrea Brock MD, Christopher R. Butson, PhD. Development: Clement Vachet, Josh Cates of the Biomedical Image and Data Analysis Core (BIDAC), Wayne Bradford, David Richardson, Tom Cheatham, Anita Orendt of the Center for High Performance Computing (CHPC)
• Electrocardiographic Imaging (ECGI): Computational Electrocardiology Group
• Consortium for ECG Imaging: Advancing ECGI Through Collaboration: Computational Electrocardiology Group

Scientific Computing

• Modelling Electrochemical Devices: Chris Gritton, James Guilkey, Justin Hooper, Dmitry Bedrov, Robert M. Kirby, Martin Berzins
• Preparing Uintah for Intel Xeon Phi-based Supercomputers: John Holmen, Damodar Sahasrabudhe, Daniel Sunderland, Alan Humphrey, and Martin Berzins
• The WRF Single-Moment 6-Class Microphysics’ (WSM6) Performance Optimization: Timbwaoga Aime Judcael Ouermi (TAJO), Aaron Knoll, Robert M Kirby, Martin Berzins
• Improving Clean Coal Technologies: Martin Berzins
• Physically Constrained Ensemble Kalman Filter: Erin Linebarger, Akil Narayan, Dongbin Xiu

Demos:

• Uintah: Allen Sanderson