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FluoRender Documentation
Article Index
FluoRender Documentation
User's Manual
Sample Data
Feature Comparison
System Requirements
ImageJ Macros & Plugins for 3D Confocal File Conversion
ImageJ Macro for 4D Confocal File Conversion and File Format Specifications
Release Notes
Contact Us
FAQ
All Pages

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FluoRender is an interactive rendering tool for confocal microscopy data visualization. It combines the rendering of multi-channel volume data and polygon mesh data, where the properties of each dataset can be adjusted independently and quickly. The tool is designed especially for neurobiologists, allowing them to better visualize confocal data from fluorescently-stained brains, but it is also useful for other biological samples.

 

11/08/2011. Ver 2.9.1 released !!

Features:

  • GPU-based volume rendering ensures fast response for real-time user interaction.
  • Multiple render modes for multi-channel confocal data.
  • Rendering properties of individual channels can be adjusted independently.
  • Intuitive and easy-to-use parameter adjustment enhances workflow efficiency.
  • Easy generation of animations and movie exporting.
  • Trimming of individual channels with clipping planes.
  • Data channels can be grouped. Gamma and brightness can be set independently for each group in layered and composite modes.
  • 4D time sequence data support.
  • 3D batch rendering for RGB TIFF files.
  • Scalar value dependent colormap.
  • RGB and 16-bit grayscale multi-layer TIFF file format support.
  • 64bit Windows systems are supported.
  • Maximum Intensity Projection (MIP) supported.
  • Clipping planes can rotate independent of the object.
  • FluoRender Twitter.
  • Equalization for 3D and 4D confocal data.
  • Shadow effects.
  • Importing volume data from Olympus and Zeiss formats.
  • New! Volume paint selection and segmentation.
  • New! Better support of Zeiss format, including larger-than-4GB data support.


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