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<title><![CDATA[CIBC ]]></title>
<link>http://www.sci.utah.edu/gallery2/v/cibc/</link>
<description><![CDATA[The overall goals of the CIBC are the creation and dissemination of biomedical technology, algorithms, and software for the mathematical modeling, simulation, and visualization of physiological phenomenon applied to problems in clinical and biological research and applications. The Center provides unique computational resources supporting clinical and biological researchers both in fundamental breakthroughs in basic biomedicine and in application of new science and technology to health care. The Center develops software (SCIRun, BioPSE, Seg3D, BioImage, BioTensor, BioFEM and soon BioMesh3D and ImageView3D), distributes it freely to the biomedical community, carries out training, and supports formal and informal collaborators. The Center also carries out technical development and original research in several related areas, including three-dimensional image analysis, scientific visualization, biomedical simulation, bioelectric field problems, problem-solving environments, and software engineering. The CIBC has a strong, ongoing emphasis on software simulation of bioelectric fields, with clinically oriented collaborations in cardiac defibrillation and the diagnosis/treatment of epilepsy. In addition, the CIBC has expanded in recent years to include applications of statistical shape analysis and three-dimensional visualization to mouse genetics and neuroimaging and applications of image and geometry processing to cell biology.]]></description>
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 <title><![CDATA[CIBC ]]></title>
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 <title><![CDATA[Skeleton, heart, kidneys and bladder visualized with ImageVis3D]]></title>
 <link>http://www.sci.utah.edu/gallery2/v/cibc/iv3d-torso.png.html</link>
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 <description><![CDATA[<a href="http://www.sci.utah.edu/gallery2/v/cibc/iv3d-torso.png.html"><img border="0" src="http://www.sci.utah.edu/gallery2/d/3232-2/iv3d-torso.png" width="150" height="144"/></a><br/>Example of volume rendering with ImageVis3D of a torso model based on a high resolution CT scan. (courtesy of Siemens Corporate Research, Princeton). By controlling transfer functions, it is possible to identify different<br />
systems (e.g. skeleton, vasculature) and organs (e.g. heart, kidneys and bladder).]]></description>
 <author>Nathan Galli</author>
 <category>photo</category>
 <pubDate>Fri, 19 Feb 2010 17:19:59 -0700</pubDate>
</item>
<item>
 <title><![CDATA[Simulation of electric field generated by an Implaned cardiac defibrillator in a torso model]]></title>
 <link>http://www.sci.utah.edu/gallery2/v/cibc/model_and_sim.tiff.html</link>
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 <description><![CDATA[<a href="http://www.sci.utah.edu/gallery2/v/cibc/model_and_sim.tiff.html"><img border="0" src="http://www.sci.utah.edu/gallery2/d/3229-3/model_and_sim.jpg" width="131" height="150"/></a>]]></description>
 <author>Nathan Galli</author>
 <category>photo</category>
 <pubDate>Fri, 19 Feb 2010 16:52:32 -0700</pubDate>
</item>
<item>
 <title><![CDATA[Volumetric Mesh]]></title>
 <link>http://www.sci.utah.edu/gallery2/v/cibc/Volumetric+Mesh.png.html</link>
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 <description><![CDATA[<a href="http://www.sci.utah.edu/gallery2/v/cibc/Volumetric+Mesh.png.html"><img border="0" src="http://www.sci.utah.edu/gallery2/d/3210-2/Volumetric+Mesh.png" width="150" height="147"/></a>]]></description>
 <author>Nathan Galli</author>
 <category>photo</category>
 <pubDate>Fri, 19 Feb 2010 17:08:46 -0700</pubDate>
</item>
<item>
 <title><![CDATA[Medial Axis]]></title>
 <link>http://www.sci.utah.edu/gallery2/v/cibc/Medial+Axis.png.html</link>
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 <description><![CDATA[<a href="http://www.sci.utah.edu/gallery2/v/cibc/Medial+Axis.png.html"><img border="0" src="http://www.sci.utah.edu/gallery2/d/3206-2/Medial+Axis.png" width="150" height="150"/></a>]]></description>
 <author>Nathan Galli</author>
 <category>photo</category>
 <pubDate>Fri, 19 Feb 2010 17:07:43 -0700</pubDate>
</item>
<item>
 <title><![CDATA[Material Boundaries]]></title>
 <link>http://www.sci.utah.edu/gallery2/v/cibc/Material+Boundaries.png.html</link>
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 <description><![CDATA[<a href="http://www.sci.utah.edu/gallery2/v/cibc/Material+Boundaries.png.html"><img border="0" src="http://www.sci.utah.edu/gallery2/d/3204-4/Material+Boundaries.gif" width="92" height="92"/></a>]]></description>
 <author>Nathan Galli</author>
 <category>photo</category>
 <pubDate>Fri, 19 Feb 2010 17:07:43 -0700</pubDate>
</item>
<item>
 <title><![CDATA[Distributed Particles]]></title>
 <link>http://www.sci.utah.edu/gallery2/v/cibc/Distributed+Particles.png.html</link>
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 <description><![CDATA[<a href="http://www.sci.utah.edu/gallery2/v/cibc/Distributed+Particles.png.html"><img border="0" src="http://www.sci.utah.edu/gallery2/d/3202-2/Distributed+Particles.png" width="150" height="149"/></a>]]></description>
 <author>Nathan Galli</author>
 <category>photo</category>
 <pubDate>Fri, 19 Feb 2010 17:07:43 -0700</pubDate>
</item>
<item>
 <title><![CDATA[Comparison of Rendering Profiles]]></title>
 <link>http://www.sci.utah.edu/gallery2/v/cibc/joe-5.png.html</link>
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 <description><![CDATA[<a href="http://www.sci.utah.edu/gallery2/v/cibc/joe-5.png.html"><img border="0" src="http://www.sci.utah.edu/gallery2/d/2809-2/joe-5.png" width="150" height="56"/></a><br/>&lt;para&gt;Visualization users are increasingly in need of techniques for assessing quantitative uncertainty and error in the images produced. Statistical segmentation algorithms compute these quantitative results, yet volume rendering tools typically produce only qualitative imagery via transfer functionbased classification. These images demonstrate a visualization technique that allows users to interactively explore the uncertainty, risk, and probabilistic decision of surface boundaries. Our approach makes it possible to directly visualize the combined &quot;fuzzy&quot; classification results from multiple segmentations by combining these data into a unified probabilistic data space. &lt;/p&gt;<br />
&lt;p&gt;The image above shows a comparison of rendering profiles. Subfigure (A) shows a &quot;fuzzy&quot; volume rendering color-mapped based on a log-scale discriminant (lambda) for white matter. Subfigure (B) shows the risk-surface (lambda equal 0) for white matter color-mapped based on sensitivity (change in boundary position per unit change in importance). Subfigure (C) shows confidence intervals based on percent change in importance.&lt;/p&gt;]]></description>
 <author>Nathan Galli</author>
 <category>photo</category>
 <pubDate>Fri, 12 Feb 2010 12:30:36 -0700</pubDate>
</item>
<item>
 <title><![CDATA[Risk Surfaces]]></title>
 <link>http://www.sci.utah.edu/gallery2/v/cibc/joe-3.png.html</link>
 <guid isPermaLink="false">http://www.sci.utah.edu/gallery2/v/cibc/joe-3.png.html</guid>
 <description><![CDATA[<a href="http://www.sci.utah.edu/gallery2/v/cibc/joe-3.png.html"><img border="0" src="http://www.sci.utah.edu/gallery2/d/2806-2/joe-3.png" width="150" height="33"/></a><br/>Visualization users are increasingly in need of techniques for assessing quantitative uncertainty and error in the images produced. Statistical segmentation algorithms compute these quantitative results, yet volume rendering tools typically produce only qualitative imagery via transfer functionbased classification. These images demonstrate a visualization technique that allows users to interactively explore the uncertainty, risk, and probabilistic decision of surface boundaries. Our approach makes it possible to directly visualize the combined &quot;fuzzy&quot; classification results from multiple segmentations by combining these data into a unified probabilistic data space.]]></description>
 <author>Nathan Galli</author>
 <category>photo</category>
 <pubDate>Fri, 12 Feb 2010 12:27:43 -0700</pubDate>
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<item>
 <title><![CDATA[Cardiac Return Current]]></title>
 <link>http://www.sci.utah.edu/gallery2/v/cibc/xt_stsurf_05.png.html</link>
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 <description><![CDATA[<a href="http://www.sci.utah.edu/gallery2/v/cibc/xt_stsurf_05.png.html"><img border="0" src="http://www.sci.utah.edu/gallery2/d/2658-2/xt_stsurf_05.png" width="150" height="112"/></a><br/>Visualization of the return current in the chest (Utah Torso data set) obtained by forward calculation. The boundary values for this computation are provided by measurements of the electrical potential done by B. Taccardi on the cardiac surface. The computation itself was carried out by F. Sachse. A smooth electric current field was derived from the electric potential. Then stream stream surfaces were computed along that current. The stream surfaces are started along isopotential lines on the surface of the heart and advected until they return to the heart, following the typical bent shape induced by the dipolar sources in the heart. The color coding shows the distortion of the parameterization of the start curve. The strength of these images is to improve on previous visualizations based on streamlines since whole volumes can now be identified, and to offer a means to better understand the relationship between in- and outflow of the electric current on the surface of the heart. Additionally, an LIC representation of the electric current was calculated constrained to the cardiac surface.]]></description>
 <author>Nathan Galli</author>
 <category>photo</category>
 <pubDate>Fri, 19 Feb 2010 14:45:00 -0700</pubDate>
</item>
<item>
 <title><![CDATA[Cardiac Return Current]]></title>
 <link>http://www.sci.utah.edu/gallery2/v/cibc/xt_stsurf_04.png.html</link>
 <guid isPermaLink="false">http://www.sci.utah.edu/gallery2/v/cibc/xt_stsurf_04.png.html</guid>
 <description><![CDATA[<a href="http://www.sci.utah.edu/gallery2/v/cibc/xt_stsurf_04.png.html"><img border="0" src="http://www.sci.utah.edu/gallery2/d/2656-2/xt_stsurf_04.png" width="150" height="112"/></a><br/>Visualization of the return current in the chest (Utah Torso data set) obtained by forward calculation. The boundary values for this computation are provided by measurements of the electrical potential done by B. Taccardi on the cardiac surface. The computation itself was carried out by F. Sachse. A smooth electric current field was derived from the electric potential. Then stream stream surfaces were computed along that current. The stream surfaces are started along isopotential lines on the surface of the heart and advected until they return to the heart, following the typical bent shape induced by the dipolar sources in the heart. The color coding shows the distortion of the parameterization of the start curve. The strength of these images is to improve on previous visualizations based on streamlines since whole volumes can now be identified, and to offer a means to better understand the relationship between in- and outflow of the electric current on the surface of the heart. Additionally, an LIC representation of the electric current was calculated constrained to the cardiac surface.]]></description>
 <author>Nathan Galli</author>
 <category>photo</category>
 <pubDate>Fri, 19 Feb 2010 14:45:00 -0700</pubDate>
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