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=='''SCIRun 4.x Documentation'''==
All PDF documentation is distributed with binary installers and is available as LaTeX files in SCIRun sources.

==='''SCIRun Version 4.3'''===

* [http://www.sci.utah.edu/releases/scirun_v4.3/.RELEASE_NOTES.txt Version 4.3 Release Notes]

==='''SCIRun Version 4.2'''===

* [http://www.sci.utah.edu/releases/scirun_v4.2/.RELEASE_NOTES.txt Version 4.2 Release Notes]

==='''SCIRun Version 4.1'''===

* [[CIBC:Documentation:SCIRun:ReleaseNotes:4.1|Version 4.1 Release Notes]]

==='''SCIRun Version 4.0'''===

* [[CIBC:Documentation:SCIRun:ReleaseNotes:4.0|Version 4.0 Release Notes]]
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==='''SCIRun FAQ'''===

* [[CIBC:Documentation:SCIRun:FAQ|Frequently Asked Questions]]

==='''SCIRun Bugs'''===

Please send bugs and feature requests to [mailto://scirun-develop@sci.utah.edu scirun-develop@sci.utah.edu].
Developers with SCI or SCI collaborator accounts can report bugs and request features
through the  [https://gforge.sci.utah.edu/gf/project/cibc/tracker tracker] on the SCI GForge portal.

==='''User Documentation'''===

* [[CIBC:Documentation:SCIRun:Installation|Installation Guide]] - Instructions on downloading and installing SCIRun on Linux, OS X, and Windows (includes information on getting the SCIRun Datasets).
*[[CIBC:Documentation:SCIRun:Reference|SCIRun Module Documentation]] - Documentation describing the function of each module 
* [http://www.sci.utah.edu/devbuilds/scirun_docs/BasicTutorial.pdf Basic Tutorial]
* Advanced tutorial: [http://www.sci.utah.edu/devbuilds/scirun_docs/IschemiaModelTutorial.pdf Heart Ischemia Model]
* Advanced tutorial: [http://www.sci.utah.edu/devbuilds/scirun_docs/DefibrillationTutorial.pdf Deﬁbrillation Model]
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==='''Developer Documentation'''===

* [[CIBC:Documentation:SCIRun:DevManual|SCIRun Developer Manual]] - General concepts and conventions underlying the SCIRun software infrastructure

* [[CIBC:Project:module_development|SCIRun Module Writing Tutorial]] - A quick introduction to writing a SCIRun module

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==='''Acknowledgment'''===

"This work was made possible in part by software from the NIH/NCRR Center for Integrative Biomedical Computing, P41-RR12553-07".
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==='''Citations'''===
Citation information for SCIRun, Seg3D and other CIBC software can be found on [http://www.sci.utah.edu/cibc/software/106-scirun.html this page].
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=='''SCIRun 3.x Documentation'''==


==='''SCIRun/BioPSE and PowerApps Version 3.0'''===

===='''General Documentation'''====
* [[CIBC:Documentation:SCIRun:Overview|Overview]] - A short description of the 'SCIRun/BioPSE' Problem Solving Environment for biomedical applications.

* SCIRun Release Notes:
** [[CIBC:Documentation:SCIRun:ReleaseNotes:3.0|Version 3.0.0]]
** [[CIBC:Documentation:SCIRun:ReleaseNotes:3.0.2|Version 3.0.2]]
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===='''User Documentation'''====
*[[CIBC:Documentation:SCIRun:Installation3|SCIRun Installation Guide]]

*[[CIBC:Documentation:SCIRun:Manual|SCIRun User Manual]] - Introduction to SCIRun

*[[CIBC:Documentation:SCIRun:Tutorial:BioPSE|SCIRun User Tutorial]] - Tutorial outlining the basics of SCIRun and BioPSE

*[[CIBC:Documentation:SCIRun:Tutorial:BioImage|BioImage Tutorial]] - Introduction to the BioImage PowerApp

*[[CIBC:Documentation:SCIRun:Tutorial:BioTensor|BioTensor Tutorial]] - Introduction to the BioTensor PowerApp

*[[CIBC:Documentation:SCIRun:Tutorial:BioFEM|BioFEM Tutorial]] - Introduction to the BioFEM PowerApp

*[[CIBC:Seg3D|Seg3D Tutorial]] - Introduction to the Seg3D PowerApp

*[[CIBC:Documentation:SCIRun:Tutorial:FusionViewer|Fusion Viewer Tutorial]] - Introduction to the Fusion Viewer application
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===='''Deprecated Developer Documentation'''====

* [http://code.sci.utah.edu/APIDocs/3.0.2/html APIDocs v3.0.2] - Doxygen documentation generated from release 3.0.2
* [http://code.sci.utah.edu/APIDocs/dev/html APIDocs development] - Doxygen documentation generated nightly from the trunk

* [[CIBC:Project:win64_development|64 Bit Windows development]] - An introduction to 64 Bit Windows development.



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==== '''SCIRun Testing''' ====
* [[CIBC:Documentation:SCIRun:Testing|SCIRun Testing]] - Information regarding the process of testing SCIRun Core classes and regression networks

* [http://dashboards.sci.utah.edu:8081/SCIRUN_CORE/Dashboard/ Dashboard] - Compilation/testing results from the latest SCIRun builds
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[[CIBC:Documentation|Documentation]]