CIBC:Documentation:SCIRun

From SCIRun Documentation Wiki

Contents 1 SCIRun 4.x Documentation 1.1 SCIRun Version 4.3 1.2 SCIRun Version 4.2 1.3 SCIRun Version 4.1 1.4 SCIRun Version 4.0 1.5 SCIRun FAQ 1.6 SCIRun Bugs 1.7 User Documentation 1.8 Developer Documentation 1.9 Acknowledgment 1.10 Citations 2 SCIRun 3.x Documentation 2.1 SCIRun/BioPSE and PowerApps Version 3.0 2.1.1 General Documentation 2.1.2 User Documentation 2.1.3 Deprecated Developer Documentation 2.1.4 SCIRun Testing

SCIRun 4.x Documentation

All PDF documentation is distributed with binary installers and is available as LaTeX files in SCIRun sources.

SCIRun Version 4.3

• Version 4.3 Release Notes

SCIRun Version 4.2

• Version 4.2 Release Notes

SCIRun Version 4.1

• Version 4.1 Release Notes

SCIRun Version 4.0

• Version 4.0 Release Notes

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SCIRun FAQ

• Frequently Asked Questions

SCIRun Bugs

Please send bugs and feature requests to scirun-develop@sci.utah.edu. Developers with SCI or SCI collaborator accounts can report bugs and request features through the tracker on the SCI GForge portal.

User Documentation

• Installation Guide - Instructions on downloading and installing SCIRun on Linux, OS X, and Windows (includes information on getting the SCIRun Datasets).
• SCIRun Module Documentation - Documentation describing the function of each module
• Basic Tutorial
• Advanced tutorial: Heart Ischemia Model
• Advanced tutorial: Defibrillation Model

Developer Documentation

• SCIRun Developer Manual - General concepts and conventions underlying the SCIRun software infrastructure

• SCIRun Module Writing Tutorial - A quick introduction to writing a SCIRun module

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Acknowledgment

"This work was made possible in part by software from the NIH/NCRR Center for Integrative Biomedical Computing, P41-RR12553-07".

Citations

Citation information for SCIRun, Seg3D and other CIBC software can be found on this page.

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SCIRun 3.x Documentation

SCIRun/BioPSE and PowerApps Version 3.0

General Documentation

• Overview - A short description of the 'SCIRun/BioPSE' Problem Solving Environment for biomedical applications.

• SCIRun Release Notes:
  • Version 3.0.0
  • Version 3.0.2

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User Documentation

• SCIRun Installation Guide

• SCIRun User Manual - Introduction to SCIRun

• SCIRun User Tutorial - Tutorial outlining the basics of SCIRun and BioPSE

• BioImage Tutorial - Introduction to the BioImage PowerApp

• BioTensor Tutorial - Introduction to the BioTensor PowerApp

• BioFEM Tutorial - Introduction to the BioFEM PowerApp

• Seg3D Tutorial - Introduction to the Seg3D PowerApp

• Fusion Viewer Tutorial - Introduction to the Fusion Viewer application

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Deprecated Developer Documentation

• APIDocs v3.0.2 - Doxygen documentation generated from release 3.0.2
• APIDocs development - Doxygen documentation generated nightly from the trunk

• 64 Bit Windows development - An introduction to 64 Bit Windows development.

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SCIRun Testing

• SCIRun Testing - Information regarding the process of testing SCIRun Core classes and regression networks

• Dashboard - Compilation/testing results from the latest SCIRun builds

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